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G2IQC2 (G2IQC2_9SPHN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodB EMBL BAK68296.1
ORF Names:SLG_36210 EMBL BAK68296.1
OrganismSphingobium sp. SYK-6 [Complete proteome] EMBL BAK68296.1
Taxonomic identifier627192 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL BAK68296.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G2IQC2 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: AF4E23C25A56880B

FASTA20322,388
        10         20         30         40         50         60 
MAFTLPDLPY AKTAFGEDMS AETFDYHHGK HHNAYVTKAN ELVAADPALQ GKSLVELIRT 

        70         80         90        100        110        120 
AKGGLFNQVG QIWNHSFFWQ CLSPETQEPT GKLAELIQEG FGSTDALIEK LKAEAVGHFA 

       130        140        150        160        170        180 
SGWAALNLTD GKLEVTSYHD ADCPVAHGAT PLFILDVWEH AYYIDYRNAR PNFADTILKK 

       190        200 
HVNWAFVAEN LDGNGAERAN QPG 

« Hide

References

[1]"Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls."
Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., Fukuda M., Yamazaki S., Fujita N.
J. Bacteriol. 194:534-535(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SYK-6 EMBL BAK68296.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012222 Genomic DNA. Translation: BAK68296.1.
RefSeqYP_004836753.1. NC_015976.1.

3D structure databases

ProteinModelPortalG2IQC2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK68296; BAK68296; SLG_36210.
GeneID11142366.
KEGGssy:SLG_36210.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04564.

Enzyme and pathway databases

BioCycSSP627192:GI2Q-3670-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2IQC2_9SPHN
AccessionPrimary (citable) accession number: G2IQC2
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)