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G2IPV4

- G2IPV4_9SPHN

UniProt

G2IPV4 - G2IPV4_9SPHN

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Protein
Submitted name: DNA ligase
Gene
lig, SLG_11070
Organism
Sphingobium sp. SYK-6
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSSP627192:GI2Q-1116-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligImported
ORF Names:SLG_11070Imported
OrganismiSphingobium sp. SYK-6Imported
Taxonomic identifieri627192 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
ProteomesiUP000001275: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2IPV4-1 [UniParc]FASTAAdd to Basket

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MRRFADLFQR LDRSTGTLEK RAALVRYFRD APPRDAAWAL WLLAGNKIGG    50
PRAKLAGSRE LRAWIAETSG TPEWLVDASY DQVGDLAETL ALLLDDPADA 100
SEDIPLATWI EDILLPVANA PEADRRAVVE RAWCTLPFGE RFLFNKLLTG 150
SLRVGVSRGL VQQALAELSG VEIALIAQRM LGAWAPSADF LAGLLSPEPQ 200
PGDMASPFPF FLASPLDQPA EALGPLEDWL VEWKWDGIRL QLIRRADDLA 250
LWSRGEERLD GRFPEIEAAA ALLPRHAVID GELLAWDAGD APLPFTALQT 300
RIQRLKPGAR TLAQAPARVL AYDLLELDGT DLRDRPLTDR RAALAALLAT 350
LDDRRIALSP EIMADNWAHA AALREMARER GVEGLMLKRR SSPYQHGRRR 400
GDWWKWKVDP MTIDAVLIYA QSGHGRRSTL HTDYTFGLWD GDVLVPVAKA 450
YSGLSDAEIL QVDQWVRKHT RERFGPVRSV EPELVFELAF EAVNLSRRHK 500
SGVAVRFPRI LRWRTDKPAS EADRLETLKA LALPSAGG 538
Length:538
Mass (Da):59,924
Last modified:November 16, 2011 - v1
Checksum:iF6E8ABC44F5F7E38
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012222 Genomic DNA. Translation: BAK65782.1.
RefSeqiWP_014075433.1. NC_015976.1.
YP_004834239.1. NC_015976.1.

Genome annotation databases

EnsemblBacteriaiBAK65782; BAK65782; SLG_11070.
GeneIDi11144050.
KEGGissy:SLG_11070.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012222 Genomic DNA. Translation: BAK65782.1 .
RefSeqi WP_014075433.1. NC_015976.1.
YP_004834239.1. NC_015976.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAK65782 ; BAK65782 ; SLG_11070 .
GeneIDi 11144050.
KEGGi ssy:SLG_11070.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SSP627192:GI2Q-1116-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG2IPV4_9SPHN
AccessioniPrimary (citable) accession number: G2IPV4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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