G2IP73 (G2IP73_9SPHN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase EMBL BAK65712.1
EC=6.5.1.1 EMBL BAK65712.1

Gene names

ORF Names:

SLG_10370 EMBL BAK65712.1

Organism

Sphingobium sp. SYK-6 EMBL BAK65712.1

Taxonomic identifier

627192 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingobium

Protein attributes

Sequence length	345 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAK65712.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G2IP73 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: F14C862BF356D9B6	FASTA	345	38,340
	10 20 30 40 50 60 MAGRLRAWFD DLLPMEARLV AELPSGDGWQ FEPKWDGFRV LILKDGPDVE LKSKSGKSLT 70 80 90 100 110 120 RFFPELAAAI GALGDRALSL DGEIILPVSD MLSFDALQQR LHPAASRIAR LSRETPAEIM 130 140 150 160 170 180 LFDVLHRGST RLADRPLEER RTALEAWHAT IRSPVLHLSP MTRDARQAKA WLDRTGGALD 190 200 210 220 230 240 GIVAKRRDAP YRGGERAMAK IKQQRTADCV VGGFREADGA VVSLLLGLYG PDGKLNHVGF 250 260 270 280 290 300 TSAIARDQRR ELRDRLLPLV APPGFTGKAP GGPSRWSGKR TSDWLPIKPS LVVEVRYDQV 310 320 330 340 TGGRFRHGTR LLRWRPDKAP EQCTSDQLEQ PLSPAQLGSL IREWE

References

[1]

"Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls." Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., Fukuda M., Yamazaki S., Fujita N. J. Bacteriol. 194:534-535(2012) Cited for: NUCLEOTIDE SEQUENCE. Strain: SYK-6 EMBL BAK65712.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012222 Genomic DNA. Translation: BAK65712.1.
RefSeq	YP_004834169.1. NC_015976.1.
3D structure databases
ProteinModelPortal	G2IP73.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAK65712; BAK65712; SLG_10370.
GeneID	11143988.
KEGG	ssy:SLG_10370.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G2IP73_9SPHN

Accession

Primary (citable) accession number: G2IP73

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)