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G2IP73

- G2IP73_9SPHN

UniProt

G2IP73 - G2IP73_9SPHN

Protein
Submitted name:

Putative DNA ligase

Gene

SLG_10370

Organism
Sphingobium sp. SYK-6
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSSP627192:GI2Q-1044-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:SLG_10370Imported
    OrganismiSphingobium sp. SYK-6Imported
    Taxonomic identifieri627192 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
    ProteomesiUP000001275: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG2IP73.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G2IP73-1 [UniParc]FASTAAdd to Basket

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    MAGRLRAWFD DLLPMEARLV AELPSGDGWQ FEPKWDGFRV LILKDGPDVE    50
    LKSKSGKSLT RFFPELAAAI GALGDRALSL DGEIILPVSD MLSFDALQQR 100
    LHPAASRIAR LSRETPAEIM LFDVLHRGST RLADRPLEER RTALEAWHAT 150
    IRSPVLHLSP MTRDARQAKA WLDRTGGALD GIVAKRRDAP YRGGERAMAK 200
    IKQQRTADCV VGGFREADGA VVSLLLGLYG PDGKLNHVGF TSAIARDQRR 250
    ELRDRLLPLV APPGFTGKAP GGPSRWSGKR TSDWLPIKPS LVVEVRYDQV 300
    TGGRFRHGTR LLRWRPDKAP EQCTSDQLEQ PLSPAQLGSL IREWE 345
    Length:345
    Mass (Da):38,340
    Last modified:November 16, 2011 - v1
    Checksum:iF14C862BF356D9B6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012222 Genomic DNA. Translation: BAK65712.1.
    RefSeqiWP_014075363.1. NC_015976.1.
    YP_004834169.1. NC_015976.1.

    Genome annotation databases

    EnsemblBacteriaiBAK65712; BAK65712; SLG_10370.
    GeneIDi11143988.
    KEGGissy:SLG_10370.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012222 Genomic DNA. Translation: BAK65712.1 .
    RefSeqi WP_014075363.1. NC_015976.1.
    YP_004834169.1. NC_015976.1.

    3D structure databases

    ProteinModelPortali G2IP73.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAK65712 ; BAK65712 ; SLG_10370 .
    GeneIDi 11143988.
    KEGGi ssy:SLG_10370.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SSP627192:GI2Q-1044-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiG2IP73_9SPHN
    AccessioniPrimary (citable) accession number: G2IP73
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3