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G2IN83 (G2IN83_9SPHN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SLG_08560 EMBL BAK65531.1
OrganismSphingobium sp. SYK-6 [Complete proteome] EMBL BAK65531.1
Taxonomic identifier627192 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium

Protein attributes

Sequence length543 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the TPP enzyme family. RuleBase RU003702

Sequences

Sequence LengthMass (Da)Tools
G2IN83 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: 2A042E67BC25C67D

FASTA54358,223
        10         20         30         40         50         60 
MKTCDAIVEI LKLEGVDVLF GYPRNALLEA AAQANIRTII PRQERIGLHM ADAYSRLTRG 

        70         80         90        100        110        120 
EKIGVFCCQH GPGAEVAYAG VAQAYGESVP ILVMPGGYST ATAHVGRNFN SVRNMAQITK 

       130        140        150        160        170        180 
SAEPLNFPSH VNAVMRRAFT ALRNGRGGPA LVELPFDVLE QDGAQVAYQP VLRSRFAPDG 

       190        200        210        220        230        240 
ESITRAASLL CAAKRPVLYA GQGIHWSGAY AELKELAELL AIPVCTSLPG KSSFDETHPL 

       250        260        270        280        290        300 
ALGSGGAAMP HAVRHFLDEA DVILGVGCSF TATAFGIRMP AGKTVIHATL DPVELNRAVE 

       310        320        330        340        350        360 
TDVALIGDAK LTLSALIAAC RALTGGAPRD MSAVTAEIRK LDDAWLAKWM PKLTSDQVPI 

       370        380        390        400        410        420 
TPYRVLWDLQ NTVDVANTII THDAGSPRDQ LSPFWKTRAP HSFLGWGKTT QLGYGLGLAM 

       430        440        450        460        470        480 
GAKLACPDKL CINVWGDAAI GFTGMDFETA VRERLPILSI LLNNASMAME LKVMPTATDR 

       490        500        510        520        530        540 
FRSTDISGNY AQFATALGGH GERISAVEDI VPAIRRAIAA TEAGKPALLE FMTSQEQEFS 


RYP 

« Hide

References

[1]"Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls."
Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., Fukuda M., Yamazaki S., Fujita N.
J. Bacteriol. 194:534-535(2012)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SYK-6 EMBL BAK65531.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012222 Genomic DNA. Translation: BAK65531.1.
RefSeqYP_004833988.1. NC_015976.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK65531; BAK65531; SLG_08560.
GeneID11143841.
KEGGssy:SLG_08560.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01652.

Enzyme and pathway databases

BioCycSSP627192:GI2Q-863-MONOMER.

Family and domain databases

InterProIPR012000. Thiamin_PyroP_enz_cen_dom.
IPR012001. Thiamin_PyroP_enz_TPP-bd_dom.
IPR000399. TPP-bd_CS.
IPR011766. TPP_enzyme-bd_C.
[Graphical view]
PfamPF02775. TPP_enzyme_C. 1 hit.
PF00205. TPP_enzyme_M. 1 hit.
PF02776. TPP_enzyme_N. 1 hit.
[Graphical view]
PROSITEPS00187. TPP_ENZYMES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2IN83_9SPHN
AccessionPrimary (citable) accession number: G2IN83
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)