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Protein
Submitted name:

Thiamine pyrophosphate enzyme

Gene

SLG_08560

Organism
Sphingobium sp. SYK-6
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. magnesium ion binding Source: InterPro
  3. thiamine pyrophosphate binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Thiamine pyrophosphateUniRule annotation

Enzyme and pathway databases

BioCyciSSP627192:GI2Q-863-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Thiamine pyrophosphate enzymeImported
Gene namesi
ORF Names:SLG_08560Imported
OrganismiSphingobium sp. SYK-6Imported
Taxonomic identifieri627192 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
ProteomesiUP000001275 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the TPP enzyme family.UniRule annotation

Phylogenomic databases

KOiK01652.

Family and domain databases

Gene3Di3.40.50.1220. 1 hit.
3.40.50.970. 2 hits.
InterProiIPR029035. DHS-like_NAD/FAD-binding_dom.
IPR029061. THDP-binding.
IPR012000. Thiamin_PyroP_enz_cen_dom.
IPR012001. Thiamin_PyroP_enz_TPP-bd_dom.
IPR000399. TPP-bd_CS.
IPR011766. TPP_enzyme-bd_C.
[Graphical view]
PfamiPF02775. TPP_enzyme_C. 1 hit.
PF00205. TPP_enzyme_M. 1 hit.
PF02776. TPP_enzyme_N. 1 hit.
[Graphical view]
SUPFAMiSSF52467. SSF52467. 1 hit.
SSF52518. SSF52518. 2 hits.
PROSITEiPS00187. TPP_ENZYMES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2IN83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTCDAIVEI LKLEGVDVLF GYPRNALLEA AAQANIRTII PRQERIGLHM
60 70 80 90 100
ADAYSRLTRG EKIGVFCCQH GPGAEVAYAG VAQAYGESVP ILVMPGGYST
110 120 130 140 150
ATAHVGRNFN SVRNMAQITK SAEPLNFPSH VNAVMRRAFT ALRNGRGGPA
160 170 180 190 200
LVELPFDVLE QDGAQVAYQP VLRSRFAPDG ESITRAASLL CAAKRPVLYA
210 220 230 240 250
GQGIHWSGAY AELKELAELL AIPVCTSLPG KSSFDETHPL ALGSGGAAMP
260 270 280 290 300
HAVRHFLDEA DVILGVGCSF TATAFGIRMP AGKTVIHATL DPVELNRAVE
310 320 330 340 350
TDVALIGDAK LTLSALIAAC RALTGGAPRD MSAVTAEIRK LDDAWLAKWM
360 370 380 390 400
PKLTSDQVPI TPYRVLWDLQ NTVDVANTII THDAGSPRDQ LSPFWKTRAP
410 420 430 440 450
HSFLGWGKTT QLGYGLGLAM GAKLACPDKL CINVWGDAAI GFTGMDFETA
460 470 480 490 500
VRERLPILSI LLNNASMAME LKVMPTATDR FRSTDISGNY AQFATALGGH
510 520 530 540
GERISAVEDI VPAIRRAIAA TEAGKPALLE FMTSQEQEFS RYP
Length:543
Mass (Da):58,223
Last modified:November 16, 2011 - v1
Checksum:i2A042E67BC25C67D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012222 Genomic DNA. Translation: BAK65531.1.
RefSeqiWP_014075182.1. NC_015976.1.
YP_004833988.1. NC_015976.1.

Genome annotation databases

EnsemblBacteriaiBAK65531; BAK65531; SLG_08560.
KEGGissy:SLG_08560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012222 Genomic DNA. Translation: BAK65531.1.
RefSeqiWP_014075182.1. NC_015976.1.
YP_004833988.1. NC_015976.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAK65531; BAK65531; SLG_08560.
KEGGissy:SLG_08560.

Phylogenomic databases

KOiK01652.

Enzyme and pathway databases

BioCyciSSP627192:GI2Q-863-MONOMER.

Family and domain databases

Gene3Di3.40.50.1220. 1 hit.
3.40.50.970. 2 hits.
InterProiIPR029035. DHS-like_NAD/FAD-binding_dom.
IPR029061. THDP-binding.
IPR012000. Thiamin_PyroP_enz_cen_dom.
IPR012001. Thiamin_PyroP_enz_TPP-bd_dom.
IPR000399. TPP-bd_CS.
IPR011766. TPP_enzyme-bd_C.
[Graphical view]
PfamiPF02775. TPP_enzyme_C. 1 hit.
PF00205. TPP_enzyme_M. 1 hit.
PF02776. TPP_enzyme_N. 1 hit.
[Graphical view]
SUPFAMiSSF52467. SSF52467. 1 hit.
SSF52518. SSF52518. 2 hits.
PROSITEiPS00187. TPP_ENZYMES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG2IN83_9SPHN
AccessioniPrimary (citable) accession number: G2IN83
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 1, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.