Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Sphingobium sp. SYK-6
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciSSP627192:GI2Q-74-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
ORF Names:SLG_00730Imported
OrganismiSphingobium sp. SYK-6Imported
Taxonomic identifieri627192 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingobium
ProteomesiUP000001275: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG2IIR8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

G2IIR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFENQDFTG QGEVEQGPSW ARKGWPLDTT DDLTAALDPT QMQLAVKAAS
60 70 80 90 100
AKSGATLSEA DIAKAAGDSI RAMMLIRTYR VRGHLAANLD PLGLVQRDLP
110 120 130 140 150
ADLTPEYHGF SGADLDRKVY IGGSLGLEWA TIREIVDILR ANYCGNVGLD
160 170 180 190 200
YMHIADVEER RFLQERMEGK DKEIIFTENG KKAILAKVIQ AEQYEKFLGR
210 220 230 240 250
KYVGTKRFGL DGGESMIPAL EAVIKYGGQL GVREIVYGMA HRGRLNVLAN
260 270 280 290 300
VMAKGFRVIF HEFSGGTANP EDVGGSGDVK YHLGTSTDRE FDGINVHMSL
310 320 330 340 350
VPNPSHLETV DPIVLGKVRA QQVFRDDIGP GQHKQVLPVL IHGDAAFAGQ
360 370 380 390 400
GIVWECFGFS GVRGYNTGGC IHFVVNNQIG FTTSPQFARS SPYPSDVAKG
410 420 430 440 450
VQAPILHVNG DDPEAVTFAC KLAIEYRQTF HRDIVIDMWC YRRFGHNEGD
460 470 480 490 500
EPSFTQPQMY AQIKQHPPVS EVYAARLREE GVVDDAFIQA TADGFVALLE
510 520 530 540 550
EEFEAAKTYK SNHADWFAGR WSGLHQPADI ETARKNVESA ISPKLFESLG
560 570 580 590 600
RTLTTVPQDL NVHRTLRRIL DAKAEMFRTG EGFDWATGEA LAFGSLLSEG
610 620 630 640 650
YGVRLSGQDS GRGTFSQRHA VWLDQETERK YIPLSTVPHG HFEVYDSPLS
660 670 680 690 700
EYGVLGFEYG YAMADPKSLV LWEAQFGDFA NGAQIIVDQY IAAAEAKWLR
710 720 730 740 750
ANGLVLLLPH GYEGQGPEHS SARVERYLQL CAEGNIQVAN CTTPANYFHI
760 770 780 790 800
LRRQMLRPFR KPLILMTPKS LLRHKLAVSK AEDFMGDRHF QRILSDPNGS
810 820 830 840 850
ADAQTRKLVL CTGKVAYDLL EARDAAGDKH TQIVRVEQLY PFPTEALSVR
860 870 880 890 900
LKRLPALEEV VWCQEEPRNN GAWFFVEPFI EQALSDAGKG PMRARYAGRK
910 920 930
PAASPATGLA RRHAAEQGAL VADALGHSVR TEIRRQKKA
Length:939
Mass (Da):103,977
Last modified:November 16, 2011 - v1
Checksum:i2E137B32D0A8C032
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012222 Genomic DNA. Translation: BAK64748.1.
RefSeqiWP_014074400.1. NC_015976.1.
YP_004833205.1. NC_015976.1.

Genome annotation databases

EnsemblBacteriaiBAK64748; BAK64748; SLG_00730.
GeneIDi11142793.
KEGGissy:SLG_00730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012222 Genomic DNA. Translation: BAK64748.1.
RefSeqiWP_014074400.1. NC_015976.1.
YP_004833205.1. NC_015976.1.

3D structure databases

ProteinModelPortaliG2IIR8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAK64748; BAK64748; SLG_00730.
GeneIDi11142793.
KEGGissy:SLG_00730.

Phylogenomic databases

KOiK00164.

Enzyme and pathway databases

BioCyciSSP627192:GI2Q-74-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG2IIR8_9SPHN
AccessioniPrimary (citable) accession number: G2IIR8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.