G2IIR8 (G2IIR8_9SPHN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL BAK64748.1
EC=1.2.4.2 EMBL BAK64748.1

Gene names

Name:	sucA EMBL BAK64748.1
ORF Names:	SLG_00730 EMBL BAK64748.1

Organism

Sphingobium sp. SYK-6 EMBL BAK64748.1

Taxonomic identifier

627192 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingobium

Protein attributes

Sequence length	939 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL BAK64748.1
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G2IIR8 [UniParc]. Last modified November 16, 2011. Version 1. Checksum: 2E137B32D0A8C032	FASTA	939	103,977
	10 20 30 40 50 60 MGFENQDFTG QGEVEQGPSW ARKGWPLDTT DDLTAALDPT QMQLAVKAAS AKSGATLSEA 70 80 90 100 110 120 DIAKAAGDSI RAMMLIRTYR VRGHLAANLD PLGLVQRDLP ADLTPEYHGF SGADLDRKVY 130 140 150 160 170 180 IGGSLGLEWA TIREIVDILR ANYCGNVGLD YMHIADVEER RFLQERMEGK DKEIIFTENG 190 200 210 220 230 240 KKAILAKVIQ AEQYEKFLGR KYVGTKRFGL DGGESMIPAL EAVIKYGGQL GVREIVYGMA 250 260 270 280 290 300 HRGRLNVLAN VMAKGFRVIF HEFSGGTANP EDVGGSGDVK YHLGTSTDRE FDGINVHMSL 310 320 330 340 350 360 VPNPSHLETV DPIVLGKVRA QQVFRDDIGP GQHKQVLPVL IHGDAAFAGQ GIVWECFGFS 370 380 390 400 410 420 GVRGYNTGGC IHFVVNNQIG FTTSPQFARS SPYPSDVAKG VQAPILHVNG DDPEAVTFAC 430 440 450 460 470 480 KLAIEYRQTF HRDIVIDMWC YRRFGHNEGD EPSFTQPQMY AQIKQHPPVS EVYAARLREE 490 500 510 520 530 540 GVVDDAFIQA TADGFVALLE EEFEAAKTYK SNHADWFAGR WSGLHQPADI ETARKNVESA 550 560 570 580 590 600 ISPKLFESLG RTLTTVPQDL NVHRTLRRIL DAKAEMFRTG EGFDWATGEA LAFGSLLSEG 610 620 630 640 650 660 YGVRLSGQDS GRGTFSQRHA VWLDQETERK YIPLSTVPHG HFEVYDSPLS EYGVLGFEYG 670 680 690 700 710 720 YAMADPKSLV LWEAQFGDFA NGAQIIVDQY IAAAEAKWLR ANGLVLLLPH GYEGQGPEHS 730 740 750 760 770 780 SARVERYLQL CAEGNIQVAN CTTPANYFHI LRRQMLRPFR KPLILMTPKS LLRHKLAVSK 790 800 810 820 830 840 AEDFMGDRHF QRILSDPNGS ADAQTRKLVL CTGKVAYDLL EARDAAGDKH TQIVRVEQLY 850 860 870 880 890 900 PFPTEALSVR LKRLPALEEV VWCQEEPRNN GAWFFVEPFI EQALSDAGKG PMRARYAGRK 910 920 930 PAASPATGLA RRHAAEQGAL VADALGHSVR TEIRRQKKA

References

[1]

"Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls." Masai E., Kamimura N., Kasai D., Oguchi A., Ankai A., Fukui S., Takahashi M., Yashiro I., Sasaki H., Harada T., Nakamura S., Katano Y., Narita-Yamada S., Nakazawa H., Hara H., Katayama Y., Fukuda M., Yamazaki S., Fujita N. J. Bacteriol. 194:534-535(2012) Cited for: NUCLEOTIDE SEQUENCE. Strain: SYK-6 EMBL BAK64748.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP012222 Genomic DNA. Translation: BAK64748.1.
RefSeq	YP_004833205.1. NC_015976.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAK64748; BAK64748; SLG_00730.
GeneID	11142793.
KEGG	ssy:SLG_00730.
Phylogenomic databases
KO	K00164.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G2IIR8_9SPHN

Accession

Primary (citable) accession number: G2IIR8

Entry history

Integrated into UniProtKB/TrEMBL:	November 16, 2011
Last sequence update:	November 16, 2011
Last modified:	April 3, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)