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Protein
Submitted name:

DNA ligase

Gene

ABLL_0827

Organism
Arcobacter sp. L
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASP944547:GL86-843-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
ORF Names:ABLL_0827Imported
OrganismiArcobacter sp. LImported
Taxonomic identifieri944547 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeArcobacter
ProteomesiUP000001290: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG2HU99.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G2HU99-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKLILIFLLN ISMYALDLQK ANIYDETKHQ INGWYMSEKL DGIRAYWNGK
60 70 80 90 100
ELLSKNGNKI YAPIWFTKNF PPFELDGELY TKRDDFENIQ NIVLDTNPSK
110 120 130 140 150
DWQQITYNIF EVPNVKGNFD KRLEKIRIWL NKNPNNYIKI IPQIICKDKK
160 170 180 190 200
HLNKYLEELV NKKAEGIILK NPYLDYENGR TNNILKVKTF FDDEGVVIGH
210 220 230 240 250
NYNKEKNFKS LVIKLKNGIV FNLGGGFSNK ERLNPPKIGE IITFKYYGFT
260
KNNKPKFASF LRIRKKE
Length:267
Mass (Da):31,530
Last modified:November 16, 2011 - v1
Checksum:i5452EC1BAB347952
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012048 Genomic DNA. Translation: BAK72702.1.
RefSeqiWP_014473541.1. NC_017192.1.
YP_005553019.1. NC_017192.1.

Genome annotation databases

EnsemblBacteriaiBAK72702; BAK72702; ABLL_0827.
GeneIDi12193841.
KEGGiarc:ABLL_0827.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012048 Genomic DNA. Translation: BAK72702.1.
RefSeqiWP_014473541.1. NC_017192.1.
YP_005553019.1. NC_017192.1.

3D structure databases

ProteinModelPortaliG2HU99.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAK72702; BAK72702; ABLL_0827.
GeneIDi12193841.
KEGGiarc:ABLL_0827.

Phylogenomic databases

KOiK01971.

Enzyme and pathway databases

BioCyciASP944547:GL86-843-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, Both Isolated from a Microbial Fuel Cell."
    Toh H., Sharma V.K., Oshima K., Kondo S., Hattori M., Ward F.B., Free A., Taylor T.D.
    J. Bacteriol. 193:6411-6412(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG2HU99_9PROT
AccessioniPrimary (citable) accession number: G2HU99
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.