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G2HM78 (G2HM78_9PROT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length340 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site331Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2491Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1181Substrate By similarity HAMAP-Rule MF_01201
Binding site2951Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue331N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G2HM78 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: F5A9DEDDD43A2575

FASTA34038,519
        10         20         30         40         50         60 
MAKILLSKEN LFYNLDVISK KAGSKEKVAV VLKDNAYGHG LVEIATLAKE FGIKKAVVRT 

        70         80         90        100        110        120 
IDDALKIEKL FDFILVLAEK SFHTYSHTFH IALNSLEDID KLPDNSNVHI KVDTGMHRNG 

       130        140        150        160        170        180 
IYPEDLEKAF LGLSKRNIKI TGVFTHHRGA DELSTDFFWQ KENFSLVKKS VKNICEKLFL 

       190        200        210        220        230        240 
PIPLFHSCNS AALFRTENFD EDFTRVGIAT YGYLDDSDVF NFPKLKPVMS LWASRLSTRI 

       250        260        270        280        290        300 
LKKGQSVGYG GTFTTTEDML VSTYDVGYGD GFLRLNERKS YTTPKGYKVL GRVSMDNLSL 

       310        320        330        340 
NTDDEKVCIF DDVRELAKIH DTITYEITTT LNPNIEKEIV

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References

[1]"Complete Genome Sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, Both Isolated from a Microbial Fuel Cell."
Toh H., Sharma V.K., Oshima K., Kondo S., Hattori M., Ward F.B., Free A., Taylor T.D.
J. Bacteriol. 193:6411-6412(2011)
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP012047 Genomic DNA. Translation: BAK70451.1.
RefSeqYP_005538261.1. NC_017187.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK70451; BAK70451; ABED_0734.
GeneID12129287.
KEGGabt:ABED_0734.

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycABUT944546:GL87-750-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG2HM78_9PROT
AccessionPrimary (citable) accession number: G2HM78
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: May 29, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info