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G1U7M4

- G1U7M4_RABIT

UniProt

G1U7M4 - G1U7M4_RABIT

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Protein
Submitted name: Uncharacterized protein
Gene
RPS29
Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RPS29Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
ProteomesiUP000001811: Chromosome 17

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiG1U7M4.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81d1-56[»]
4KZYX-ray7.01d1-56[»]
4KZZX-ray7.03d1-56[»]
ProteinModelPortaliG1U7M4.
SMRiG1U7M4. Positions 4-56.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000005814.
OMAiCFREKAA.
OrthoDBiEOG78D7P4.
TreeFamiTF300217.

Family and domain databases

InterProiIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
[Graphical view]
PfamiPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1U7M4-1 [UniParc]FASTAAdd to Basket

« Hide

MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI   50
GFIKLD 56
Length:56
Mass (Da):6,677
Last modified:October 19, 2011 - v1
Checksum:i41325122B493EFF9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02050031 Genomic DNA. No translation available.
RefSeqiNP_001276741.1. NM_001289812.1.
XP_002710749.1. XM_002710703.2.
UniGeneiOcu.6557.
Ocu.8119.

Genome annotation databases

EnsembliENSOCUT00000023198; ENSOCUP00000025432; ENSOCUG00000027423.
GeneIDi100337712.
100347924.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02050031 Genomic DNA. No translation available.
RefSeqi NP_001276741.1. NM_001289812.1.
XP_002710749.1. XM_002710703.2.
UniGenei Ocu.6557.
Ocu.8119.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4KZX X-ray 7.81 d 1-56 [» ]
4KZY X-ray 7.01 d 1-56 [» ]
4KZZ X-ray 7.03 d 1-56 [» ]
ProteinModelPortali G1U7M4.
SMRi G1U7M4. Positions 4-56.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi G1U7M4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSOCUT00000023198 ; ENSOCUP00000025432 ; ENSOCUG00000027423 .
GeneIDi 100337712.
100347924.

Phylogenomic databases

GeneTreei ENSGT00390000005814.
OMAi CFREKAA.
OrthoDBi EOG78D7P4.
TreeFami TF300217.

Family and domain databases

InterProi IPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
[Graphical view ]
Pfami PF00253. Ribosomal_S14. 1 hit.
[Graphical view ]
PROSITEi PS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome Sequence of Oryctolagus cuniculus (European rabbit)."
    The Genome Sequencing Platform
    Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThorbeckeImported.
  2. "A high-resolution map of human evolutionary constraint using 29 mammals."
    Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
    , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
    Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Thorbecke.
  3. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThorbeckeImported.
  4. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
    Lomakin I.B., Steitz T.A.
    Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Entry informationi

Entry nameiG1U7M4_RABIT
AccessioniPrimary (citable) accession number: G1U7M4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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