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G1U7M4

- G1U7M4_RABIT

UniProt

G1U7M4 - G1U7M4_RABIT

Protein
Submitted name:

Uncharacterized protein

Gene

RPS29

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:RPS29Imported
    OrganismiOryctolagus cuniculus (Rabbit)Imported
    Taxonomic identifieri9986 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
    ProteomesiUP000001811: Chromosome 17

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: InterPro

    PTM / Processingi

    Proteomic databases

    PRIDEiG1U7M4.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KZXX-ray7.81d1-56[»]
    4KZYX-ray7.01d1-56[»]
    4KZZX-ray7.03d1-56[»]
    ProteinModelPortaliG1U7M4.
    SMRiG1U7M4. Positions 4-56.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000005814.
    OMAiCFREKAA.
    OrthoDBiEOG78D7P4.
    TreeFamiTF300217.

    Family and domain databases

    InterProiIPR001209. Ribosomal_S14.
    IPR018271. Ribosomal_S14_CS.
    [Graphical view]
    PfamiPF00253. Ribosomal_S14. 1 hit.
    [Graphical view]
    PROSITEiPS00527. RIBOSOMAL_S14. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G1U7M4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI   50
    GFIKLD 56
    Length:56
    Mass (Da):6,677
    Last modified:October 19, 2011 - v1
    Checksum:i41325122B493EFF9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02050031 Genomic DNA. No translation available.
    RefSeqiNP_001276741.1. NM_001289812.1.
    XP_002710749.1. XM_002710703.2.
    UniGeneiOcu.6557.
    Ocu.8119.

    Genome annotation databases

    EnsembliENSOCUT00000023198; ENSOCUP00000025432; ENSOCUG00000027423.
    GeneIDi100337712.
    100347924.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02050031 Genomic DNA. No translation available.
    RefSeqi NP_001276741.1. NM_001289812.1.
    XP_002710749.1. XM_002710703.2.
    UniGenei Ocu.6557.
    Ocu.8119.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KZX X-ray 7.81 d 1-56 [» ]
    4KZY X-ray 7.01 d 1-56 [» ]
    4KZZ X-ray 7.03 d 1-56 [» ]
    ProteinModelPortali G1U7M4.
    SMRi G1U7M4. Positions 4-56.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi G1U7M4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSOCUT00000023198 ; ENSOCUP00000025432 ; ENSOCUG00000027423 .
    GeneIDi 100337712.
    100347924.

    Organism-specific databases

    CTDi 6235.

    Phylogenomic databases

    GeneTreei ENSGT00390000005814.
    OMAi CFREKAA.
    OrthoDBi EOG78D7P4.
    TreeFami TF300217.

    Family and domain databases

    InterProi IPR001209. Ribosomal_S14.
    IPR018271. Ribosomal_S14_CS.
    [Graphical view ]
    Pfami PF00253. Ribosomal_S14. 1 hit.
    [Graphical view ]
    PROSITEi PS00527. RIBOSOMAL_S14. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome Sequence of Oryctolagus cuniculus (European rabbit)."
      The Genome Sequencing Platform
      Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
      Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ThorbeckeImported.
    2. "A high-resolution map of human evolutionary constraint using 29 mammals."
      Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
      , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
      Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ThorbeckeImported.
    3. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: ThorbeckeImported.
    4. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
      Lomakin I.B., Steitz T.A.
      Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

    Entry informationi

    Entry nameiG1U7M4_RABIT
    AccessioniPrimary (citable) accession number: G1U7M4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3