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G1U7M4 (G1U7M4_RABIT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length56 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSOCUP00000025432

Ontologies

Keywords
   Technical term3D-structure PDB 4KZX PDB 4KZY PDB 4KZZ
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G1U7M4 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 41325122B493EFF9

FASTA566,677
        10         20         30         40         50 
MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI GFIKLD 

« Hide

References

« Hide 'large scale' references
[1]"Genome Sequence of Oryctolagus cuniculus (European rabbit)."
The Genome Sequencing Platform
Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Thorbecke Ensembl ENSOCUP00000025432.
[2]"A high-resolution map of human evolutionary constraint using 29 mammals."
Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J. expand/collapse author list , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Thorbecke.
[3]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Thorbecke Ensembl ENSOCUP00000025432.
[4]"The initiation of mammalian protein synthesis and mRNA scanning mechanism."
Lomakin I.B., Steitz T.A.
Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAGW02050031 Genomic DNA. No translation available.
RefSeqNP_001276741.1. NM_001289812.1.
XP_002710749.1. XM_002710703.1.
UniGeneOcu.6557.
Ocu.8119.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81d1-56[»]
4KZYX-ray7.01d1-56[»]
4KZZX-ray7.03d1-56[»]
ProteinModelPortalG1U7M4.
SMRG1U7M4. Positions 4-56.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEG1U7M4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSOCUT00000023198; ENSOCUP00000025432; ENSOCUG00000027423.
GeneID100337712.
100347924.

Phylogenomic databases

GeneTreeENSGT00390000005814.
OMACFREKAA.
OrthoDBEOG78D7P4.
TreeFamTF300217.

Family and domain databases

InterProIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
[Graphical view]
PfamPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG1U7M4_RABIT
AccessionPrimary (citable) accession number: G1U7M4
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)