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G1U472

- G1U472_RABIT

UniProt

G1U472 - G1U472_RABIT

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Protein
Submitted name:

Uncharacterized protein

Gene

LOC100351184

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC100351184Imported
Synonyms:LOC100343884Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
ProteomesiUP000001811: Chromosome 1, UP000001811: Chromosome 17

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: Ensembl
  2. ribosome Source: UniProtKB-KW
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81O1-151[»]
4KZYX-ray7.01O1-151[»]
4KZZX-ray7.03O1-151[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S11P family.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000000703.
OrthoDBiEOG77DJ81.
TreeFamiTF300125.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11.
InterProiIPR001971. Ribosomal_S11.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1U472-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAPRKGKEKK EEQVISLGPQ VAEGENVFGV CHIFASFNDT FVHVTDLSGK
60 70 80 90 100
ETICRVTGGM KVKADRDESS PYAAMLAAQD VAQRCKELGI TALHIKLRAT
110 120 130 140 150
GGNRTKTPGP GAQSALRALA RSGMKIGRIE DVTPIPSDST RRKGGRRGRR

L
Length:151
Mass (Da):16,273
Last modified:October 19, 2011 - v1
Checksum:i4F4387F9FADAC278
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02024470 Genomic DNA. No translation available.
AAGW02048509 Genomic DNA. No translation available.
RefSeqiXP_002710354.1. XM_002710308.2.
XP_002710355.1. XM_002710309.2.
XP_008254686.1. XM_008256464.1.
XP_008267447.1. XM_008269225.1.

Genome annotation databases

EnsembliENSOCUT00000028522; ENSOCUP00000020690; ENSOCUG00000025034.
ENSOCUT00000029787; ENSOCUP00000024191; ENSOCUG00000026323.
GeneIDi100337691.
100343884.
100351184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02024470 Genomic DNA. No translation available.
AAGW02048509 Genomic DNA. No translation available.
RefSeqi XP_002710354.1. XM_002710308.2.
XP_002710355.1. XM_002710309.2.
XP_008254686.1. XM_008256464.1.
XP_008267447.1. XM_008269225.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4KZX X-ray 7.81 O 1-151 [» ]
4KZY X-ray 7.01 O 1-151 [» ]
4KZZ X-ray 7.03 O 1-151 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSOCUT00000028522 ; ENSOCUP00000020690 ; ENSOCUG00000025034 .
ENSOCUT00000029787 ; ENSOCUP00000024191 ; ENSOCUG00000026323 .
GeneIDi 100337691.
100343884.
100351184.

Organism-specific databases

CTDi 6208.

Phylogenomic databases

GeneTreei ENSGT00390000000703.
OrthoDBi EOG77DJ81.
TreeFami TF300125.

Family and domain databases

Gene3Di 3.30.420.80. 1 hit.
HAMAPi MF_01310. Ribosomal_S11.
InterProi IPR001971. Ribosomal_S11.
IPR018102. Ribosomal_S11_CS.
[Graphical view ]
PANTHERi PTHR11759. PTHR11759. 1 hit.
Pfami PF00411. Ribosomal_S11. 1 hit.
[Graphical view ]
PIRSFi PIRSF002131. Ribosomal_S11. 1 hit.
PROSITEi PS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome Sequence of Oryctolagus cuniculus (European rabbit)."
    The Genome Sequencing Platform
    Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThorbeckeImported.
  2. "A high-resolution map of human evolutionary constraint using 29 mammals."
    Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
    , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
    Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThorbeckeImported.
  3. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThorbeckeImported.
  4. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
    Lomakin I.B., Steitz T.A.
    Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Entry informationi

Entry nameiG1U472_RABIT
AccessioniPrimary (citable) accession number: G1U472
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3