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G1U0Q2

- G1U0Q2_RABIT

UniProt

G1U0Q2 - G1U0Q2_RABIT

Protein
Submitted name:

Uncharacterized protein

Gene

RPS15

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:RPS15Imported
    OrganismiOryctolagus cuniculus (Rabbit)Imported
    Taxonomic identifieri9986 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
    ProteomesiUP000001811: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KZXX-ray7.81P1-145[»]
    4KZYX-ray7.01P1-145[»]
    4KZZX-ray7.03P1-145[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S19P family.UniRule annotation

    Phylogenomic databases

    GeneTreeiENSGT00390000000475.
    OMAiYCARQRR.
    OrthoDBiEOG780RPS.
    TreeFamiTF318650.

    Family and domain databases

    Gene3Di3.30.860.10. 1 hit.
    HAMAPiMF_00531. Ribosomal_S19.
    InterProiIPR002222. Ribosomal_S19.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    IPR005713. Ribosomal_S19A/S15e.
    [Graphical view]
    PANTHERiPTHR11880. PTHR11880. 1 hit.
    PfamiPF00203. Ribosomal_S19. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSiPR00975. RIBOSOMALS19.
    SUPFAMiSSF54570. SSF54570. 1 hit.
    TIGRFAMsiTIGR01025. rpsS_arch. 1 hit.
    PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G1U0Q2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEVEQKKKR TFRKFTYRGV DLDQLLDMSY EQLMQLYSAR QRRRLSRGLR    50
    RKQHSLLKRL RKAKKEAPPM EKPEVVKTHL RDMIILPEMV GSMVGVYNGK 100
    TFNQVEIKPE MIGHYLGEFS ITYKPVKHGR PGIGATHSSR FIPLK 145
    Length:145
    Mass (Da):17,013
    Last modified:October 19, 2011 - v1
    Checksum:i48BDD133FC275D89
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02031749 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSOCUT00000002860; ENSOCUP00000022933; ENSOCUG00000002862.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02031749 Genomic DNA. No translation available.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KZX X-ray 7.81 P 1-145 [» ]
    4KZY X-ray 7.01 P 1-145 [» ]
    4KZZ X-ray 7.03 P 1-145 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSOCUT00000002860 ; ENSOCUP00000022933 ; ENSOCUG00000002862 .

    Phylogenomic databases

    GeneTreei ENSGT00390000000475.
    OMAi YCARQRR.
    OrthoDBi EOG780RPS.
    TreeFami TF318650.

    Family and domain databases

    Gene3Di 3.30.860.10. 1 hit.
    HAMAPi MF_00531. Ribosomal_S19.
    InterProi IPR002222. Ribosomal_S19.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    IPR005713. Ribosomal_S19A/S15e.
    [Graphical view ]
    PANTHERi PTHR11880. PTHR11880. 1 hit.
    Pfami PF00203. Ribosomal_S19. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSi PR00975. RIBOSOMALS19.
    SUPFAMi SSF54570. SSF54570. 1 hit.
    TIGRFAMsi TIGR01025. rpsS_arch. 1 hit.
    PROSITEi PS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A high-resolution map of human evolutionary constraint using 29 mammals."
      Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
      , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
      Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ThorbeckeImported.
    2. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: ThorbeckeImported.
    3. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
      Lomakin I.B., Steitz T.A.
      Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

    Entry informationi

    Entry nameiG1U0Q2_RABIT
    AccessioniPrimary (citable) accession number: G1U0Q2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3