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Protein

40S ribosomal protein S27

Gene

LOC100345694

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S27UniRule annotation
Gene namesi
Name:LOC100345694Imported
Synonyms:LOC100345044Imported, LOC100348261Imported, RPS27Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi37 ↔ 40Combined sources
Disulfide bondi56 ↔ 59Combined sources

Expressioni

Gene expression databases

BgeeiENSOCUG00000011792.

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000022396.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65bb2-84[»]
3JAHelectron microscopy3.45bb2-84[»]
3JAIelectron microscopy3.65bb2-84[»]
4D5Lelectron microscopy9.00b1-84[»]
4D61electron microscopy9.00b1-84[»]
4KZXX-ray7.81b1-84[»]
4KZYX-ray7.01b1-84[»]
4KZZX-ray7.03b1-84[»]
5K0Yelectron microscopy5.80Y1-84[»]
5LZSelectron microscopy3.31bb1-84[»]
5LZTelectron microscopy3.65bb1-84[»]
5LZUelectron microscopy3.75bb1-84[»]
5LZVelectron microscopy3.35bb1-84[»]
5LZWelectron microscopy3.53bb1-84[»]
5LZXelectron microscopy3.67bb1-84[»]
5LZYelectron microscopy3.99bb1-84[»]
5LZZelectron microscopy3.47bb1-84[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS27 family.UniRule annotation

Keywords - Domaini

Zinc-fingerUniRule annotation

Phylogenomic databases

eggNOGiKOG1779. Eukaryota.
COG2051. LUCA.
GeneTreeiENSGT00390000013514.
KOiK02978.
OMAiCDNCSTV.
OrthoDBiEOG091G157G.
TreeFamiTF300265.

Family and domain databases

Gene3Di2.20.25.100. 1 hit.
HAMAPiMF_00371. Ribosomal_S27e. 1 hit.
InterProiView protein in InterPro
IPR000592. Ribosomal_S27e.
IPR023407. Ribosomal_S27e_Zn-bd_dom_sf.
IPR011332. Ribosomal_zn-bd.
PANTHERiPTHR11594. PTHR11594. 1 hit.
PfamiView protein in Pfam
PF01667. Ribosomal_S27e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD004466. Ribosomal_S27e. 1 hit.
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiView protein in PROSITE
PS01168. RIBOSOMAL_S27E. 1 hit.

Sequencei

Sequence statusi: Complete.

G1TZ76-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLAKDLLHP SPEEEKRKHK KKRLVQSPNS YFMDVKCPGC YKITTVFSHA
60 70 80
QTVVLCVGCS TVLCQPTGGK ARLTEGCSFR RKQH
Length:84
Mass (Da):9,461
Last modified:October 19, 2011 - v1
Checksum:i242C4466AC8A8900
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02000499 Genomic DNA. No translation available.
AAGW02000817 Genomic DNA. No translation available.
AAGW02025095 Genomic DNA. No translation available.
AAGW02048517 Genomic DNA. No translation available.
RefSeqiXP_002708254.1. XM_002708208.3.
XP_002715522.1. XM_002715476.3.
XP_002715798.1. XM_002715752.3.
XP_002718158.1. XM_002718112.3.

Genome annotation databases

EnsembliENSOCUT00000009733; ENSOCUP00000022234; ENSOCUG00000022442.
ENSOCUT00000011789; ENSOCUP00000010135; ENSOCUG00000011792.
ENSOCUT00000023068; ENSOCUP00000022396; ENSOCUG00000025002.
ENSOCUT00000029745; ENSOCUP00000021064; ENSOCUG00000024168.
GeneIDi100345044.
100345694.
100348261.
100356638.
KEGGiocu:100345044.
ocu:100345694.
ocu:100348261.
ocu:100356638.

Similar proteinsi

Entry informationi

Entry nameiG1TZ76_RABIT
AccessioniPrimary (citable) accession number: G1TZ76
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 22, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported