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G1TU13

- G1TU13_RABIT

UniProt

G1TU13 - G1TU13_RABIT

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Protein
Submitted name:

Uncharacterized protein

Gene
LOC100359176
Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC100359176Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
ProteomesiUP000001811: Chromosome 10

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiG1TU13.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81R1-135[»]
4KZYX-ray7.01R1-135[»]
4KZZX-ray7.03R1-135[»]
ProteinModelPortaliG1TU13.
SMRiG1TU13. Positions 1-126.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000006548.
OMAiHETTENI.
OrthoDBiEOG72C52C.
TreeFamiTF317992.

Family and domain databases

Gene3Di1.10.60.20. 1 hit.
HAMAPiMF_00511. Ribosomal_S17e.
InterProiIPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view]
PANTHERiPTHR10732. PTHR10732. 1 hit.
PfamiPF00833. Ribosomal_S17e. 1 hit.
[Graphical view]
SUPFAMiSSF116820. SSF116820. 1 hit.
PROSITEiPS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1TU13-1 [UniParc]FASTAAdd to Basket

« Hide

MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKKLRNKI    50
AGYVTHLMKR IQRGPVRGIS IKLQEEERER RDNYVPEVSA LDQEIIEVDP 100
DTKEMLKLLD FGSLSNLQVT QPTVGMNFKT PRGAV 135
Length:135
Mass (Da):15,524
Last modified:October 19, 2011 - v1
Checksum:i29806605C5401325
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02061996 Genomic DNA. No translation available.
RefSeqiXP_002713874.1. XM_002713828.2.
XP_002721523.1. XM_002721477.2.
UniGeneiOcu.3413.
Ocu.8135.

Genome annotation databases

EnsembliENSOCUT00000005303; ENSOCUP00000020536; ENSOCUG00000005304.
GeneIDi100353606.
100359176.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAGW02061996 Genomic DNA. No translation available.
RefSeqi XP_002713874.1. XM_002713828.2.
XP_002721523.1. XM_002721477.2.
UniGenei Ocu.3413.
Ocu.8135.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4KZX X-ray 7.81 R 1-135 [» ]
4KZY X-ray 7.01 R 1-135 [» ]
4KZZ X-ray 7.03 R 1-135 [» ]
ProteinModelPortali G1TU13.
SMRi G1TU13. Positions 1-126.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi G1TU13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSOCUT00000005303 ; ENSOCUP00000020536 ; ENSOCUG00000005304 .
GeneIDi 100353606.
100359176.

Phylogenomic databases

GeneTreei ENSGT00390000006548.
OMAi HETTENI.
OrthoDBi EOG72C52C.
TreeFami TF317992.

Family and domain databases

Gene3Di 1.10.60.20. 1 hit.
HAMAPi MF_00511. Ribosomal_S17e.
InterProi IPR001210. Ribosomal_S17e.
IPR018273. Ribosomal_S17e_CS.
[Graphical view ]
PANTHERi PTHR10732. PTHR10732. 1 hit.
Pfami PF00833. Ribosomal_S17e. 1 hit.
[Graphical view ]
SUPFAMi SSF116820. SSF116820. 1 hit.
PROSITEi PS00712. RIBOSOMAL_S17E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome Sequence of Oryctolagus cuniculus (European rabbit)."
    The Genome Sequencing Platform
    Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ThorbeckeImported.
  2. "A high-resolution map of human evolutionary constraint using 29 mammals."
    Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
    , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
    Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Thorbecke.
  3. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: ThorbeckeImported.
  4. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
    Lomakin I.B., Steitz T.A.
    Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Entry informationi

Entry nameiG1TU13_RABIT
AccessioniPrimary (citable) accession number: G1TU13
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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