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Protein
Submitted name:

Uncharacterized protein

Gene

LOC100356144

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:LOC100356144Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Unplaced

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSOCUG00000014699

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000018898

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4D5Lelectron microscopy9.00S1-152[»]
4D61electron microscopy9.00S1-152[»]
4KZXX-ray7.81S1-152[»]
4KZYX-ray7.01S1-152[»]
4KZZX-ray7.03S1-152[»]
5K0Yelectron microscopy5.80L6-142[»]
5LZSelectron microscopy3.31SS1-152[»]
5LZTelectron microscopy3.65SS1-152[»]
5LZUelectron microscopy3.75SS1-152[»]
5LZVelectron microscopy3.35SS1-152[»]
5LZWelectron microscopy3.53SS1-152[»]
5LZXelectron microscopy3.67SS1-152[»]
5LZYelectron microscopy3.99SS1-152[»]
5LZZelectron microscopy3.47SS1-152[»]
ProteinModelPortaliG1TPG3
SMRiG1TPG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3311 Eukaryota
COG0099 LUCA
GeneTreeiENSGT00390000012691
InParanoidiG1TPG3
KOiK02964
OMAiHKRGQKV
OrthoDBiEOG091G0W4F
TreeFamiTF317649

Family and domain databases

Gene3Di4.10.910.101 hit
HAMAPiMF_01315 Ribosomal_S13_S18, 1 hit
InterProiView protein in InterPro
IPR027437 30s_Rbsml_prot_S13_C
IPR001892 Ribosomal_S13
IPR010979 Ribosomal_S13-like_H2TH
IPR018269 Ribosomal_S13_CS
PfamiView protein in Pfam
PF00416 Ribosomal_S13, 1 hit
PIRSFiPIRSF002134 Ribosomal_S13, 1 hit
SUPFAMiSSF46946 SSF46946, 1 hit
PROSITEiView protein in PROSITE
PS00646 RIBOSOMAL_S13_1, 1 hit
PS50159 RIBOSOMAL_S13_2, 1 hit

Sequencei

Sequence statusi: Complete.

G1TPG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLVIPEKFQ HILRVLNTNI DGRRKIAFAI TAIKGVGRRY AHVVLRKADI
60 70 80 90 100
DLTKRAGELT EDEVERVITI MQNPRQYKIP DWFLNRQKDV KDGKYSQVLA
110 120 130 140 150
NGLDNKLRED LERLKKIRAH RGLRHFWGLR VRGQHTKTTG RRGRTVGVSK

KK
Length:152
Mass (Da):17,719
Last modified:October 19, 2011 - v1
Checksum:i4DAF0662C3F37F22
GO

Sequence databases

RefSeqiXP_002714578.1, XM_002714532.3
XP_002720764.1, XM_002720718.3
XP_017200532.1, XM_017345043.1

Genome annotation databases

EnsembliENSOCUT00000014693; ENSOCUP00000018898; ENSOCUG00000014699
GeneIDi100349921
100356144
KEGGiocu:100349921
ocu:100356144

Similar proteinsi

Entry informationi

Entry nameiG1TPG3_RABIT
AccessioniPrimary (citable) accession number: G1TPG3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: March 28, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported