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G1TN62

- G1TN62_RABIT

UniProt

G1TN62 - G1TN62_RABIT

Protein
Submitted name:

Uncharacterized protein

Gene

RPS19

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. erythrocyte differentiation Source: Ensembl
    2. maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: Ensembl
    3. monocyte chemotaxis Source: Ensembl
    4. negative regulation of respiratory burst involved in inflammatory response Source: Ensembl
    5. nucleolus organization Source: Ensembl
    6. positive regulation of respiratory burst involved in inflammatory response Source: Ensembl
    7. protein tetramerization Source: Ensembl
    8. ribosomal small subunit assembly Source: Ensembl
    9. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:RPS19Imported
    OrganismiOryctolagus cuniculus (Rabbit)Imported
    Taxonomic identifieri9986 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
    ProteomesiUP000001811: Chromosome 14

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic small ribosomal subunit Source: Ensembl
    2. nucleolus Source: Ensembl

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KZXX-ray7.81T1-145[»]
    4KZYX-ray7.01T1-145[»]
    4KZZX-ray7.03T1-145[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000013102.
    OMAiELAPCDD.
    OrthoDBiEOG74J99M.
    TreeFamiTF315008.

    Family and domain databases

    InterProiIPR001266. Ribosomal_S19e.
    IPR018277. Ribosomal_S19e_CS.
    [Graphical view]
    PANTHERiPTHR11710. PTHR11710. 1 hit.
    PfamiPF01090. Ribosomal_S19e. 1 hit.
    [Graphical view]
    ProDomiPD003854. Ribosomal_S19e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    PROSITEiPS00628. RIBOSOMAL_S19E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G1TN62-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPGVTVKDVN QQEFVRALAA FLKKSGKLKV PEWVDTVKLA KHKELAPYDE    50
    NWFYTRAAST ARHLYLRGGA GVGSMTKIYG GRQRNGVMPS HFSRGSKSVA 100
    RRVLQALEGL KMVEKDQDWG RKLTPQGQRD LDRIAGQVAA AKKKH 145
    Length:145
    Mass (Da):16,204
    Last modified:October 19, 2011 - v1
    Checksum:i181F3CBEF8E56E41
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02048164 Genomic DNA. No translation available.
    RefSeqiXP_002716238.1. XM_002716192.2.
    UniGeneiOcu.3678.

    Genome annotation databases

    EnsembliENSOCUT00000023161; ENSOCUP00000018431; ENSOCUG00000026336.
    GeneIDi100345774.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02048164 Genomic DNA. No translation available.
    RefSeqi XP_002716238.1. XM_002716192.2.
    UniGenei Ocu.3678.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KZX X-ray 7.81 T 1-145 [» ]
    4KZY X-ray 7.01 T 1-145 [» ]
    4KZZ X-ray 7.03 T 1-145 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSOCUT00000023161 ; ENSOCUP00000018431 ; ENSOCUG00000026336 .
    GeneIDi 100345774.

    Phylogenomic databases

    GeneTreei ENSGT00390000013102.
    OMAi ELAPCDD.
    OrthoDBi EOG74J99M.
    TreeFami TF315008.

    Family and domain databases

    InterProi IPR001266. Ribosomal_S19e.
    IPR018277. Ribosomal_S19e_CS.
    [Graphical view ]
    PANTHERi PTHR11710. PTHR11710. 1 hit.
    Pfami PF01090. Ribosomal_S19e. 1 hit.
    [Graphical view ]
    ProDomi PD003854. Ribosomal_S19e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    PROSITEi PS00628. RIBOSOMAL_S19E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A high-resolution map of human evolutionary constraint using 29 mammals."
      Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
      , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
      Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ThorbeckeImported.
    2. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: ThorbeckeImported.
    3. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
      Lomakin I.B., Steitz T.A.
      Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

    Entry informationi

    Entry nameiG1TN62_RABIT
    AccessioniPrimary (citable) accession number: G1TN62
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3