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Protein
Submitted name:

Uncharacterized protein

Gene

RPS28

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RPS28Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiG1TIB4.

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000016683.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65cc8-68[»]
3JAHelectron microscopy3.45cc8-68[»]
3JAIelectron microscopy3.65cc8-68[»]
4D5Lelectron microscopy9.00c1-69[»]
4D61electron microscopy9.00c1-69[»]
4KZXX-ray7.81c1-69[»]
4KZYX-ray7.01c1-69[»]
4KZZX-ray7.03c1-69[»]
ProteinModelPortaliG1TIB4.
SMRiG1TIB4. Positions 8-68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3502. Eukaryota.
COG2053. LUCA.
GeneTreeiENSGT00390000003580.
InParanoidiG1TIB4.
OMAiTEVLCRT.
OrthoDBiEOG091G19WT.
TreeFamiTF300136.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00292. Ribosomal_S28e. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000289. Ribosomal_S28e.
IPR028626. Ribosomal_S28e_CS.
[Graphical view]
PANTHERiPTHR10769. PTHR10769. 1 hit.
PfamiPF01200. Ribosomal_S28e. 1 hit.
[Graphical view]
ProDomiPD005541. Ribosomal_S28e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00961. RIBOSOMAL_S28E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1TIB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTSRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDTSR SIIRNVKGPV
60
REGDVLTLLE SEREARRLR
Length:69
Mass (Da):7,841
Last modified:October 19, 2011 - v1
Checksum:i49902FE9376EB74F
GO

Genome annotation databases

EnsembliENSOCUT00000030802; ENSOCUP00000016683; ENSOCUG00000021484.

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65cc8-68[»]
3JAHelectron microscopy3.45cc8-68[»]
3JAIelectron microscopy3.65cc8-68[»]
4D5Lelectron microscopy9.00c1-69[»]
4D61electron microscopy9.00c1-69[»]
4KZXX-ray7.81c1-69[»]
4KZYX-ray7.01c1-69[»]
4KZZX-ray7.03c1-69[»]
ProteinModelPortaliG1TIB4.
SMRiG1TIB4. Positions 8-68.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000016683.

Proteomic databases

PRIDEiG1TIB4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSOCUT00000030802; ENSOCUP00000016683; ENSOCUG00000021484.

Phylogenomic databases

eggNOGiKOG3502. Eukaryota.
COG2053. LUCA.
GeneTreeiENSGT00390000003580.
InParanoidiG1TIB4.
OMAiTEVLCRT.
OrthoDBiEOG091G19WT.
TreeFamiTF300136.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00292. Ribosomal_S28e. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000289. Ribosomal_S28e.
IPR028626. Ribosomal_S28e_CS.
[Graphical view]
PANTHERiPTHR10769. PTHR10769. 1 hit.
PfamiPF01200. Ribosomal_S28e. 1 hit.
[Graphical view]
ProDomiPD005541. Ribosomal_S28e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00961. RIBOSOMAL_S28E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiG1TIB4_RABIT
AccessioniPrimary (citable) accession number: G1TIB4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 7, 2016
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.