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G1T168

- G1T168_RABIT

UniProt

G1T168 - G1T168_RABIT

Protein
Submitted name:

Uncharacterized protein

Gene

LOC100352164

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 2 (13 Nov 2013)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:LOC100352164Imported
    OrganismiOryctolagus cuniculus (Rabbit)Imported
    Taxonomic identifieri9986 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
    ProteomesiUP000001811: Chromosome 12

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic small ribosomal subunit Source: Ensembl
    2. nucleolus Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiG1T168.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KZXX-ray7.81K61-225[»]
    4KZYX-ray7.01K61-225[»]
    4KZZX-ray7.03K61-225[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00440000034918.
    OrthoDBiEOG7VB2H1.
    TreeFamiTF319100.

    Family and domain databases

    InterProiIPR005326. S10_plectin_N.
    [Graphical view]
    PfamiPF03501. S10_plectin. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G1T168-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRTRAGRAAA RASRPSGTAE ATPDSARVLA GGGATPARKR RCAAHAPSFP    50
    ASAPNPTAAA MLMPKKNRIA IYELLFKEGV MVAKKDVHMP KHPELADKNV 100
    PNLHVMKAMQ SLKSRGYVKE QFAWRHFYWY LTNEGIQYLR DYLHLPPEIV 150
    PATLRRSRPE TGRPRPKGLE GERPARLTRG EADRDTYRRS AVPPGADKKA 200
    EAGAGSATEF QFRGGFGRGR GQPPQ 225
    Length:225
    Mass (Da):24,777
    Last modified:November 13, 2013 - v2
    Checksum:i667C9E8EA1C10B49
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02017781 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSOCUT00000011373; ENSOCUP00000009787; ENSOCUG00000011373.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAGW02017781 Genomic DNA. No translation available.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KZX X-ray 7.81 K 61-225 [» ]
    4KZY X-ray 7.01 K 61-225 [» ]
    4KZZ X-ray 7.03 K 61-225 [» ]
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi G1T168.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSOCUT00000011373 ; ENSOCUP00000009787 ; ENSOCUG00000011373 .

    Phylogenomic databases

    GeneTreei ENSGT00440000034918.
    OrthoDBi EOG7VB2H1.
    TreeFami TF319100.

    Family and domain databases

    InterProi IPR005326. S10_plectin_N.
    [Graphical view ]
    Pfami PF03501. S10_plectin. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A high-resolution map of human evolutionary constraint using 29 mammals."
      Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J.
      , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
      Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ThorbeckeImported.
    2. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: ThorbeckeImported.
    3. "The initiation of mammalian protein synthesis and mRNA scanning mechanism."
      Lomakin I.B., Steitz T.A.
      Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS) OF 61-225.

    Entry informationi

    Entry nameiG1T168_RABIT
    AccessioniPrimary (citable) accession number: G1T168
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: November 13, 2013
    Last modified: October 1, 2014
    This is version 29 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3