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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 12

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000019041.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4D5Lelectron microscopy9.00K61-225[»]
4D61electron microscopy9.00K61-225[»]
4KZXX-ray7.81K61-225[»]
4KZYX-ray7.01K61-225[»]
4KZZX-ray7.03K61-225[»]
5K0Yelectron microscopy5.80t61-158[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini63 – 157S10_plectinInterPro annotationAdd BLAST95

Phylogenomic databases

eggNOGiKOG3344. Eukaryota.
COG5045. LUCA.
GeneTreeiENSGT00440000034918.
InParanoidiG1T168.
OMAiIANWLEM.
OrthoDBiEOG091G0QTW.
TreeFamiTF319100.

Family and domain databases

InterProiIPR005326. S10_plectin_N.
[Graphical view]
PfamiPF03501. S10_plectin. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1T168-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTRAGRAAA RASRPSGTAE ATPDSARVLA GGGATPARKR RCAAHAPSFP
60 70 80 90 100
ASAPNPTAAA MLMPKKNRIA IYELLFKEGV MVAKKDVHMP KHPELADKNV
110 120 130 140 150
PNLHVMKAMQ SLKSRGYVKE QFAWRHFYWY LTNEGIQYLR DYLHLPPEIV
160 170 180 190 200
PATLRRSRPE TGRPRPKGLE GERPARLTRG EADRDTYRRS AVPPGADKKA
210 220
EAGAGSATEF QFRGGFGRGR GQPPQ
Length:225
Mass (Da):24,777
Last modified:November 13, 2013 - v2
Checksum:i667C9E8EA1C10B49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02017781 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSOCUT00000011373; ENSOCUP00000009787; ENSOCUG00000011373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02017781 Genomic DNA. No translation available.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4D5Lelectron microscopy9.00K61-225[»]
4D61electron microscopy9.00K61-225[»]
4KZXX-ray7.81K61-225[»]
4KZYX-ray7.01K61-225[»]
4KZZX-ray7.03K61-225[»]
5K0Yelectron microscopy5.80t61-158[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000019041.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSOCUT00000011373; ENSOCUP00000009787; ENSOCUG00000011373.

Phylogenomic databases

eggNOGiKOG3344. Eukaryota.
COG5045. LUCA.
GeneTreeiENSGT00440000034918.
InParanoidiG1T168.
OMAiIANWLEM.
OrthoDBiEOG091G0QTW.
TreeFamiTF319100.

Family and domain databases

InterProiIPR005326. S10_plectin_N.
[Graphical view]
PfamiPF03501. S10_plectin. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiG1T168_RABIT
AccessioniPrimary (citable) accession number: G1T168
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: November 13, 2013
Last modified: November 30, 2016
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.