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Protein
Submitted name:

Ribosomal protein S13

Gene

RPS13

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein S13Imported
Gene namesi
Name:RPS13Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Unplaced

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSOCUG00000005536

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000004803

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65NN2-151[»]
3JAHelectron microscopy3.45NN2-151[»]
3JAIelectron microscopy3.65NN2-151[»]
4D5Lelectron microscopy9.00N1-151[»]
4D61electron microscopy9.00N1-151[»]
4KZXX-ray7.81N1-151[»]
4KZYX-ray7.01N1-151[»]
4KZZX-ray7.03N1-151[»]
5K0Yelectron microscopy5.80Z2-151[»]
5LZSelectron microscopy3.31NN1-151[»]
5LZTelectron microscopy3.65NN1-151[»]
5LZUelectron microscopy3.75NN1-151[»]
5LZVelectron microscopy3.35NN1-151[»]
5LZWelectron microscopy3.53NN1-151[»]
5LZXelectron microscopy3.67NN1-151[»]
5LZYelectron microscopy3.99NN1-151[»]
5LZZelectron microscopy3.47NN1-151[»]
ProteinModelPortaliG1SP51
SMRiG1SP51
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 60Ribosomal_S13_NInterPro annotationAdd BLAST60

Sequence similaritiesi

Belongs to the universal ribosomal protein uS15 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0400 Eukaryota
COG0184 LUCA
GeneTreeiENSGT00390000017491
InParanoidiG1SP51
KOiK02953
OMAiWHLVKKA
OrthoDBiEOG091G0X8F
TreeFamiTF300190

Family and domain databases

CDDicd00353 Ribosomal_S15p_S13e, 1 hit
HAMAPiMF_01343_A Ribosomal_S15_A, 1 hit
InterProiView protein in InterPro
IPR012606 Ribosomal_S13/S15_N
IPR000589 Ribosomal_S15
IPR023029 Ribosomal_S15P
IPR009068 S15_NS1_RNA-bd
PANTHERiPTHR11885 PTHR11885, 1 hit
PfamiView protein in Pfam
PF08069 Ribosomal_S13_N, 1 hit
PF00312 Ribosomal_S15, 1 hit
SMARTiView protein in SMART
SM01386 Ribosomal_S13_N, 1 hit
SM01387 Ribosomal_S15, 1 hit
SUPFAMiSSF47060 SSF47060, 1 hit
PROSITEiView protein in PROSITE
PS00362 RIBOSOMAL_S15, 1 hit

Sequencei

Sequence statusi: Complete.

G1SP51-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIYKL AKKGLTPSQI
60 70 80 90 100
GVILRDSHGV AQVRFVTGNK ILRILKSKGL APDLPEDLYH LIKKAVAVRK
110 120 130 140 150
HLERNRKDKD AKFRLILIES RIHRLARYYK TKRVLPPNWK YESSTASALV

A
Length:151
Mass (Da):17,222
Last modified:October 19, 2011 - v1
Checksum:i23F94D38F87B8D53
GO

Sequence databases

RefSeqiXP_002721403.1, XM_002721357.3

Genome annotation databases

EnsembliENSOCUT00000005534; ENSOCUP00000004803; ENSOCUG00000005536
GeneIDi100340445
KEGGiocu:100340445

Similar proteinsi

Entry informationi

Entry nameiG1SP51_RABIT
AccessioniPrimary (citable) accession number: G1SP51
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 25, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health