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Protein
Submitted name:

B-cell CLL/lymphoma 6

Gene

BCL6

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
B-cell CLL/lymphoma 6Imported
Gene namesi
Name:BCL6Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 14

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSOCUG00000005429.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000004710.

Structurei

3D structure databases

ProteinModelPortaliG1SNX1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 99BTBInterPro annotationAdd BLAST68
Domaini520 – 548C2H2-typeInterPro annotationAdd BLAST29
Domaini548 – 575C2H2-typeInterPro annotationAdd BLAST28
Domaini576 – 603C2H2-typeInterPro annotationAdd BLAST28
Domaini604 – 631C2H2-typeInterPro annotationAdd BLAST28
Domaini632 – 659C2H2-typeInterPro annotationAdd BLAST28
Domaini660 – 683C2H2-typeInterPro annotationAdd BLAST24

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00890000139443.
InParanoidiG1SNX1.
KOiK15618.
OMAiNECDCRF.
OrthoDBiEOG091G025U.
TreeFamiTF330912.

Family and domain databases

InterProiView protein in InterPro
IPR000210. BTB/POZ_dom.
IPR011333. SKP1/BTB/POZ_sf.
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
PfamiView protein in Pfam
PF00651. BTB. 1 hit.
SMARTiView protein in SMART
SM00225. BTB. 1 hit.
SM00355. ZnF_C2H2. 6 hits.
SUPFAMiSSF54695. SSF54695. 1 hit.
SSF57667. SSF57667. 3 hits.
PROSITEiView protein in PROSITE
PS50097. BTB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 6 hits.
PS50157. ZINC_FINGER_C2H2_2. 6 hits.

Sequencei

Sequence statusi: Complete.

G1SNX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPADSCIQ FTRHASDVLL NLNRLRSRDI LTDVVIVVSR EQFRAHKTVL
60 70 80 90 100
MACSGLFYSI FTDQLKCNLS VINLDPEINP EGFCILLDFM YTSRLNLREG
110 120 130 140 150
NIMAVMATAM YLQMEHVVDT CRKFIKASEA EMVPALKPPR EEFLNSRMLM
160 170 180 190 200
PHDLMAYRGR EVVENNLPLR NAPGCESRAF APSLYGGLST PPASYPMYSH
210 220 230 240 250
LPVSSFLFSD EELRDARMPM ANPFPKERAL PCDSARPMPA EYNRPALEVS
260 270 280 290 300
PGVCHSSIYS HSPKEAVPEE ARNDMHYSVA EGPKPAAPSA RNVPYFPCDK
310 320 330 340 350
AGKEEERPSS EDEIALHFEP PNAPLNRKGL VSPQSPQKSD CQPNSPTESC
360 370 380 390 400
SSKNACILQA SGSPPAKSPT DPKACNWKKY KFIVLNSLNQ NAKPEGPEQA
410 420 430 440 450
ELGRLSPRAY TAPAACQPPL EPENIDLQSP AKLSAAGEDS SIPQASRLNT
460 470 480 490 500
IVNRSLTGSP RSSGESHSPL YMHPPKCTSC GAQSPQHAEM CLHTAGPTFP
510 520 530 540 550
EEMGETQSEY SDSSCENGAF FCNECDCRFS EEASLKRHTL QTHSDKPYKC
560 570 580 590 600
DRCQASFRYK GNLASHKTVH TGEKPYRCNI CGAQFNRPAN LKTHTRIHSG
610 620 630 640 650
EKPYKCETCG ARFVQVAHLR AHVLIHTGEK PYPCEICGTR FRHLQTLKSH
660 670 680 690 700
LRIHTGEKPY HCEKCNLHFR HKSQLRLHLR QKHGAITNTK VQYRVSATEL

PPELPKAC
Length:708
Mass (Da):78,858
Last modified:November 13, 2013 - v2
Checksum:iC30450C21448E4E4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02014007 Genomic DNA. No translation available.
RefSeqiXP_002716546.1. XM_002716500.2.
XP_008264864.1. XM_008266642.2.
XP_008264865.1. XM_008266643.2.

Genome annotation databases

EnsembliENSOCUT00000005428; ENSOCUP00000004710; ENSOCUG00000005429.
GeneIDi100353941.
KEGGiocu:100353941.

Similar proteinsi

Entry informationi

Entry nameiG1SNX1_RABIT
AccessioniPrimary (citable) accession number: G1SNX1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: November 13, 2013
Last modified: November 22, 2017
This is version 53 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported