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Protein
Submitted name:

Uncharacterized protein

Gene

RPS20

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:RPS20Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 3

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000002668.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65UU16-119[»]
3JAHelectron microscopy3.45UU16-119[»]
3JAIelectron microscopy3.65UU16-119[»]
4D5Lelectron microscopy9.00U1-119[»]
4D61electron microscopy9.00U1-119[»]
4KZXX-ray7.81U1-119[»]
4KZYX-ray7.01U1-119[»]
4KZZX-ray7.03U1-119[»]
5K0Yelectron microscopy5.80h16-119[»]
ProteinModelPortaliG1SIZ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 115Ribosomal_S10InterPro annotationAdd BLAST95

Phylogenomic databases

eggNOGiKOG0900. Eukaryota.
COG0051. LUCA.
GeneTreeiENSGT00390000003248.
InParanoidiG1SIZ2.
KOiK02969.
OMAiWDRYELK.
OrthoDBiEOG091G0VNB.
TreeFamiTF300222.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
IPR005729. Ribosomal_S10_euk/arc.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01046. uS10_euk_arch. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1SIZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFKDTGKTP VEPEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKNLKV
60 70 80 90 100
KGPVRMPTKT LRITTRKTPC GEGSKTWDRF QMRIHKRLID LHSPSEIVKQ
110
ITSISIEPGV EVEVTIADA
Length:119
Mass (Da):13,373
Last modified:October 19, 2011 - v1
Checksum:i8802DF7894ADDF94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02047266 Genomic DNA. No translation available.
RefSeqiNP_001240663.1. NM_001253734.1.
XP_002708159.1. XM_002708113.3.
XP_002716496.1. XM_002716450.3.
XP_002719308.1. XM_002719262.3.
UniGeneiOcu.1464.

Genome annotation databases

EnsembliENSOCUT00000003066; ENSOCUP00000002668; ENSOCUG00000003068.
GeneIDi100341252.
100341365.
100348955.
100354063.
KEGGiocu:100341252.
ocu:100341365.
ocu:100348955.
ocu:100354063.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02047266 Genomic DNA. No translation available.
RefSeqiNP_001240663.1. NM_001253734.1.
XP_002708159.1. XM_002708113.3.
XP_002716496.1. XM_002716450.3.
XP_002719308.1. XM_002719262.3.
UniGeneiOcu.1464.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65UU16-119[»]
3JAHelectron microscopy3.45UU16-119[»]
3JAIelectron microscopy3.65UU16-119[»]
4D5Lelectron microscopy9.00U1-119[»]
4D61electron microscopy9.00U1-119[»]
4KZXX-ray7.81U1-119[»]
4KZYX-ray7.01U1-119[»]
4KZZX-ray7.03U1-119[»]
5K0Yelectron microscopy5.80h16-119[»]
ProteinModelPortaliG1SIZ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000002668.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSOCUT00000003066; ENSOCUP00000002668; ENSOCUG00000003068.
GeneIDi100341252.
100341365.
100348955.
100354063.
KEGGiocu:100341252.
ocu:100341365.
ocu:100348955.
ocu:100354063.

Organism-specific databases

CTDi6224.

Phylogenomic databases

eggNOGiKOG0900. Eukaryota.
COG0051. LUCA.
GeneTreeiENSGT00390000003248.
InParanoidiG1SIZ2.
KOiK02969.
OMAiWDRYELK.
OrthoDBiEOG091G0VNB.
TreeFamiTF300222.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
IPR005729. Ribosomal_S10_euk/arc.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01046. uS10_euk_arch. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiG1SIZ2_RABIT
AccessioniPrimary (citable) accession number: G1SIZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 30, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.