Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G1SIZ2 (G1SIZ2_RABIT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length119 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSOCUP00000002668

Sequences

Sequence LengthMass (Da)Tools
G1SIZ2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 8802DF7894ADDF94

FASTA11913,373
        10         20         30         40         50         60 
MAFKDTGKTP VEPEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKNLKV KGPVRMPTKT 

        70         80         90        100        110 
LRITTRKTPC GEGSKTWDRF QMRIHKRLID LHSPSEIVKQ ITSISIEPGV EVEVTIADA 

« Hide

References

« Hide 'large scale' references
[1]"Genome Sequence of Oryctolagus cuniculus (European rabbit)."
The Genome Sequencing Platform
Di Palma F., Heiman D., Young S., Gnerre S., Johnson J., Lander E.S., Lindblad-Toh K.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Thorbecke Ensembl ENSOCUP00000002668.
[2]"A high-resolution map of human evolutionary constraint using 29 mammals."
Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J., Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E., Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J., Beal K., Chang J. expand/collapse author list , Clawson H., Cuff J., Di Palma F., Fitzgerald S., Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I., Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I., Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J., Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D., Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L., Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S., Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G., Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K., Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T., Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J., Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S., Pedersen J.S., Lander E.S., Kellis M.
Nature 478:476-482(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Thorbecke.
[3]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Thorbecke Ensembl ENSOCUP00000002668.
[4]"The initiation of mammalian protein synthesis and mRNA scanning mechanism."
Lomakin I.B., Steitz T.A.
Nature 500:307-311(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (7.01 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAGW02047266 Genomic DNA. No translation available.
RefSeqNP_001240663.1. NM_001253734.1.
XP_002708159.1. XM_002708113.1.
XP_002716496.1. XM_002716450.1.
XP_002717018.1. XM_002716972.1.
XP_002719308.1. XM_002719262.1.
UniGeneOcu.1464.
Ocu.8080.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4KZXX-ray7.81U1-119[»]
4KZYX-ray7.01U1-119[»]
4KZZX-ray7.03U1-119[»]
ProteinModelPortalG1SIZ2.
SMRG1SIZ2. Positions 16-119.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEG1SIZ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSOCUT00000003066; ENSOCUP00000002668; ENSOCUG00000003068.
GeneID100008653.
100341252.
100341365.
100348955.
100354063.

Organism-specific databases

CTD6224.

Phylogenomic databases

GeneTreeENSGT00390000003248.
OMAYELKIHK.
OrthoDBEOG7KH9MQ.
TreeFamTF300222.

Family and domain databases

Gene3D3.30.70.600. 1 hit.
HAMAPMF_00508. Ribosomal_S10.
InterProIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
IPR005729. Ribosomal_S10_euk/arc.
[Graphical view]
PANTHERPTHR11700. PTHR11700. 1 hit.
PfamPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSPR00971. RIBOSOMALS10.
SUPFAMSSF54999. SSF54999. 1 hit.
TIGRFAMsTIGR01046. S10_Arc_S20_Euk. 1 hit.
PROSITEPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG1SIZ2_RABIT
AccessionPrimary (citable) accession number: G1SIZ2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)