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Protein

40S ribosomal protein S12

Gene

RPS12

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S12UniRule annotation
Gene namesi
Name:RPS12Imported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 12

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSOCUG00000001606.

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000001378.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JAGelectron microscopy3.65MM9-132[»]
3JAHelectron microscopy3.45MM9-132[»]
3JAIelectron microscopy3.65MM9-132[»]
4D5Lelectron microscopy9.00M1-132[»]
4D61electron microscopy9.00M1-132[»]
4KZXX-ray7.81M1-132[»]
4KZYX-ray7.01M1-132[»]
4KZZX-ray7.03M1-132[»]
5K0Yelectron microscopy5.80r9-132[»]
5LZSelectron microscopy3.31MM1-132[»]
5LZTelectron microscopy3.65MM1-132[»]
5LZUelectron microscopy3.75MM1-132[»]
5LZVelectron microscopy3.35MM1-132[»]
5LZWelectron microscopy3.53MM1-132[»]
5LZXelectron microscopy3.67MM1-132[»]
5LZYelectron microscopy3.99MM1-132[»]
5LZZelectron microscopy3.47MM1-132[»]
ProteinModelPortaliG1SFR8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 110Ribosomal_L7AeInterPro annotationAdd BLAST94

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS12 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3406. Eukaryota.
COG1358. LUCA.
GeneTreeiENSGT00390000018318.
InParanoidiG1SFR8.
KOiK02951.
OMAiGLRECAK.
OrthoDBiEOG091G0UB5.
TreeFamiTF300196.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiView protein in InterPro
IPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR000530. Ribosomal_S12e.
PANTHERiPTHR11843. PTHR11843. 1 hit.
PfamiView protein in Pfam
PF01248. Ribosomal_L7Ae. 1 hit.
PRINTSiPR00972. RIBSOMALS12E.
SUPFAMiSSF55315. SSF55315. 1 hit.
PROSITEiView protein in PROSITE
PS01189. RIBOSOMAL_S12E. 1 hit.

Sequencei

Sequence statusi: Complete.

G1SFR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEEGIAAGG VMDVNTALQE VLKTALIHDG LARGIREAAK ALDKRQAHLC
60 70 80 90 100
VLASNCDEPM YVKLVEALCA EHQINLIKVD DNKKLGEWVG LCKIDREGKP
110 120 130
RKVVGCSCVV VKDYGKESQA KDVIEEYFKC KK
Length:132
Mass (Da):14,515
Last modified:October 19, 2011 - v1
Checksum:i45AD1274D55FFA25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02028778 Genomic DNA. No translation available.
RefSeqiXP_002714875.1. XM_002714829.3.

Genome annotation databases

EnsembliENSOCUT00000001606; ENSOCUP00000001378; ENSOCUG00000001606.
GeneIDi100345945.
KEGGiocu:100345945.

Similar proteinsi

Entry informationi

Entry nameiG1SFR8_RABIT
AccessioniPrimary (citable) accession number: G1SFR8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 27, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported