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Protein
Submitted name:

T brachyury transcription factor

Gene

T

Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T brachyury transcription factorImported
Gene namesi
Name:TImported
OrganismiOryctolagus cuniculus (Rabbit)Imported
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
Proteomesi
  • UP000001811 Componenti: Chromosome 12

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000000574.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585. Eukaryota.
ENOG410XSTS. LUCA.
GeneTreeiENSGT00760000118897.
InParanoidiG1SDS8.
OMAiAPSCVYI.
OrthoDBiEOG091G05OC.
TreeFamiTF106341.

Family and domain databases

CDDicd00182. TBOX. 1 hit.
Gene3Di2.60.40.820. 1 hit.
InterProiView protein in InterPro
IPR008967. p53-like_TF_DNA-bd.
IPR002070. TF_Brachyury.
IPR001699. TF_T-box.
IPR018186. TF_T-box_CS.
PANTHERiPTHR11267. PTHR11267. 1 hit.
PfamiView protein in Pfam
PF00907. T-box. 1 hit.
PRINTSiPR00938. BRACHYURY.
PR00937. TBOX.
SMARTiView protein in SMART
SM00425. TBOX. 1 hit.
SUPFAMiSSF49417. SSF49417. 1 hit.
PROSITEiView protein in PROSITE
PS01264. TBOX_2. 1 hit.
PS50252. TBOX_3. 1 hit.

Sequencei

Sequence statusi: Complete.

G1SDS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XLRFKELTNE MIVTKNGRRM FPVLKVNVSG LDPNAMYSFL LDFVAADSHR
60 70 80 90 100
WKFVNGEWVP GGKPEPQAPS CVYIHPDSPN FGAHWMKAPV SFSKVKLTNK
110 120 130 140 150
LNGGGQIMLN SLHKYEPRIH IVRVGGPQRM ITSHCFPETQ FIAVTAYQNE
160 170 180 190 200
EITALKIKYN PFAKAFLDAK ERSDHKDAME EAGDGQQPGY SQSGGWLIPG
210 220 230 240 250
PSALCPPASP HPQFGGSLSL PSAHGCERYP ALRSHRSSPY PSPYAHRNNS
260 270 280 290 300
PTYPDSSSAC LPMLPSHDSW SSLGVPAHSG VLPVSHNASP PAGSSQYPSL
310 320 330 340 350
WAVSNSAITP GSQTAAVSSG LGAQFFRGSP AHYAPLTHGV PAASSGSPLY
360 370 380
DGAATVTDIP DSQYDASAQG RLLASWTPVP PPSM
Length:384
Mass (Da):41,206
Last modified:October 19, 2011 - v1
Checksum:i1ABF318C5A003B78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAGW02053052 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSOCUT00000000660; ENSOCUP00000000574; ENSOCUG00000000660.

Similar proteinsi

Entry informationi

Entry nameiG1SDS8_RABIT
AccessioniPrimary (citable) accession number: G1SDS8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: August 30, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported