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Protein
Submitted name:

PHD finger protein 21A

Gene

PHF21A

Organism
Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 21AImported
Gene namesi
Name:PHF21AImported
OrganismiNomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys)Imported
Taxonomic identifieri61853 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHylobatidaeNomascus
Proteomesi
  • UP000001073 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini489 – 536PHD-typeInterPro annotationAdd BLAST48

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili30 – 57Sequence analysisAdd BLAST28
Coiled coili563 – 601Sequence analysisAdd BLAST39

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IREA. Eukaryota.
ENOG41112YM. LUCA.
GeneTreeiENSGT00530000063984.
InParanoidiG1RUS1.
OMAiHEDFCTV.
OrthoDBiEOG091G03CB.
TreeFamiTF331518.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00628. PHD. 1 hit.
SMARTiView protein in SMART
SM00249. PHD. 1 hit.
SUPFAMiSSF57903. SSF57903. 1 hit.
PROSITEiView protein in PROSITE
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.

Sequencei

Sequence statusi: Complete.

G1RUS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK
60 70 80 90 100
QKRVVEQLRK NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ
110 120 130 140 150
YHHHHAQQSA AASPNLTASQ KTVTTASMIT TKTLPLVLKA ATATMPASVV
160 170 180 190 200
GQRPTIAMVT AINSQKAVLS TDVQNTPVNL QTSSKVTGPG AEAVQIVAKN
210 220 230 240 250
TVTLQVQATP PQPIKVPQFI PPPRLTPRPN FLPQVRPKPV AQNNIPIAPA
260 270 280 290 300
PPPMLAAPQL IQRPVMLTKF TPTTLPTSQN SIHPVRVVNG QTATIAKTFP
310 320 330 340 350
MAQLTSIVIA TPGTRLAGPQ TVQLSKPSLE KQTVKSHTET DEKQTESRTI
360 370 380 390 400
TPPAAPKPKR EENPQKLAFM VSLGLVTHDH LEEIQSKRQE RKRRTTANPV
410 420 430 440 450
YSGAVFEPER KKSAVTYLNS TMHPGTRKRG RPPKYNAVLG FGALTPTSPQ
460 470 480 490 500
SSHPDSPENE KTETTFTFPA PVQPVSLPSP TSTDGDIHED FCSVCRKSGQ
510 520 530 540 550
LLMCDTCSRV YHLDCLDPPL KTIPKGMWIC PRCQDQMLKK EEAIPWPGTL
560 570 580 590 600
AIVHSYIAYK AAKEEEKQKL LKWSSDLKQE REQLEQKVKQ LSNSISKCMD
610 620 630 640 650
MKNAILARQK EMHSSLEKVK QLIRLIHGID LSKPVDSEAT VGAISNGPDC
660 670 680
TPPANAATST PAPSPSSQSC TANCNQGEET K
Length:681
Mass (Da):74,938
Last modified:October 19, 2011 - v1
Checksum:iE246AE616CF6B59D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADFV01115696 Genomic DNA. No translation available.
ADFV01115697 Genomic DNA. No translation available.
ADFV01115698 Genomic DNA. No translation available.
ADFV01115699 Genomic DNA. No translation available.
ADFV01115700 Genomic DNA. No translation available.
ADFV01115701 Genomic DNA. No translation available.
ADFV01115702 Genomic DNA. No translation available.
ADFV01115703 Genomic DNA. No translation available.
ADFV01115704 Genomic DNA. No translation available.
ADFV01115705 Genomic DNA. No translation available.
RefSeqiXP_012361113.1. XM_012505659.1.

Genome annotation databases

EnsembliENSNLET00000017858; ENSNLEP00000016998; ENSNLEG00000013978.
GeneIDi100605627.
KEGGinle:100605627.

Similar proteinsi

Entry informationi

Entry nameiG1RUS1_NOMLE
AccessioniPrimary (citable) accession number: G1RUS1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: August 30, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported