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G1NJS0

- G1NJS0_MELGA

UniProt

G1NJS0 - G1NJS0_MELGA

Protein
Submitted name:

Uncharacterized protein

Gene

ALKBH1

Organism
Meleagris gallopavo (Common turkey)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. chemoattractant activity Source: Ensembl
    2. DNA-(apurinic or apyrimidinic site) lyase activity Source: Ensembl
    3. ferrous iron binding Source: Ensembl
    4. methylcytosine dioxygenase activity Source: Ensembl

    GO - Biological processi

    1. developmental growth Source: Ensembl
    2. DNA dealkylation involved in DNA repair Source: Ensembl
    3. DNA demethylation Source: Ensembl
    4. in utero embryonic development Source: Ensembl
    5. negative regulation of neuron apoptotic process Source: Ensembl
    6. neuron migration Source: Ensembl
    7. neuron projection development Source: Ensembl
    8. oxidative demethylation Source: Ensembl
    9. placenta development Source: Ensembl
    10. RNA repair Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:ALKBH1Imported
    OrganismiMeleagris gallopavo (Common turkey)Imported
    Taxonomic identifieri9103 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaeMeleagridinaeMeleagris
    ProteomesiUP000001645: Chromosome 5

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrion Source: Ensembl
    2. nuclear euchromatin Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000004599.
    OMAiKKYSADH.
    OrthoDBiEOG71P2CK.
    TreeFamiTF314609.

    Family and domain databases

    Gene3Di2.60.120.590. 2 hits.
    InterProiIPR027450. AlkB-like.
    IPR005123. Oxoglu/Fe-dep_dioxygenase.
    [Graphical view]
    PfamiPF13532. 2OG-FeII_Oxy_2. 1 hit.
    [Graphical view]
    PROSITEiPS51471. FE2OG_OXY. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    G1NJS0-1 [UniParc]FASTAAdd to Basket

    « Hide

    QVFRSQLSVS SVSDQDACRA GLQPVSRWKA YGLNGYPGFI FIQNPFLPGC    50
    QRHWVKQCLK LYTQKPNVCN LDLHMAPEKT ADLWGQSKEK LRRKGSSKCE 100
    PRSLLEKLRW VTLGYHYNWD TKKYSANHHT PFPSDLAFLS EQVAAACGFR 150
    GFQAQAGILN YYHFDSSLGI HVDESELDHS HPLLSFSFGQ SSIFLLGGLK 200
    REEAPTAMFM HSGDIMVMSG FSRLLYHAVP RVLPNPEGTA LPSCLDQALS 250
    TDLPVGSVIE HSSDEDWQVC AKYLQSSRIN MTIRQVLAEG QKFPEESGTN 300
    TESRVPSEDG HHQENSRAKR HKPNTDS 327
    Length:327
    Mass (Da):36,755
    Last modified:October 19, 2011 - v1
    Checksum:i8C07E4A85D61A580
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported

    Genome annotation databases

    EnsembliENSMGAT00000014520; ENSMGAP00000013608; ENSMGAG00000012910.

    Cross-referencesi

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMGAT00000014520 ; ENSMGAP00000013608 ; ENSMGAG00000012910 .

    Phylogenomic databases

    GeneTreei ENSGT00390000004599.
    OMAi KKYSADH.
    OrthoDBi EOG71P2CK.
    TreeFami TF314609.

    Family and domain databases

    Gene3Di 2.60.120.590. 2 hits.
    InterProi IPR027450. AlkB-like.
    IPR005123. Oxoglu/Fe-dep_dioxygenase.
    [Graphical view ]
    Pfami PF13532. 2OG-FeII_Oxy_2. 1 hit.
    [Graphical view ]
    PROSITEi PS51471. FE2OG_OXY. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis."
      Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A., Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K., Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C., Frederickson K.M.
      , Flicek P., Florea L., Folkerts O., Groenen M.A., Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A., de Jong P., Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D., Lee M.K., Lee T., Mane S., Marcais G., Marz M., McElroy A.P., Modise T., Nefedov M., Notredame C., Paton I.R., Payne W.S., Pertea G., Prickett D., Puiu D., Qioa D., Raineri E., Ruffier M., Salzberg S.L., Schatz M.C., Scheuring C., Schmidt C.J., Schroeder S., Searle S.M., Smith E.J., Smith J., Sonstegard T.S., Stadler P.F., Tafer H., Tu Z.J., Van Tassell C.P., Vilella A.J., Williams K.P., Yorke J.A., Zhang L., Zhang H.B., Zhang X., Zhang Y., Reed K.M.
      PLoS Biol. 8:E1000475-E1000475(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiG1NJS0_MELGA
    AccessioniPrimary (citable) accession number: G1NJS0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3