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Protein
Submitted name:

Uncharacterized protein

Gene

TGM4

Organism
Meleagris gallopavo (Common turkey)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cofactori

Note: Binds 1 calcium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei267 – 2671UniRule annotation
Active sitei326 – 3261UniRule annotation
Active sitei349 – 3491UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TGM4Imported
OrganismiMeleagris gallopavo (Common turkey)Imported
Taxonomic identifieri9103 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaeMeleagridinaeMeleagris
ProteomesiUP000001645 Componenti: Chromosome 6

Interactioni

Protein-protein interaction databases

STRINGi9103.ENSMGAP00000017984.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119108.
OrthoDBiEOG7WT40M.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 1 hit.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1NGK7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQDRDLKVT KVDFLKSQNS VQHHTDAYNT SNLVVRRGQP FLVQLTLSRE
60 70 80 90 100
LRASDKLSLH FSIGEKPKEP TGTLMSLNPR STRNVSGWQI SIVKSSGTEC
110 120 130 140 150
TLSVTSAPNA AVGIYGLIVK TGPNVYKPEK NTVYLLFNPW CEGDIVFLSN
160 170 180 190 200
EAERKEYVLN DTGYIYVGSA FNIHSKPWNF GQFEESILDA CMYLLDKSKL
210 220 230 240 250
KMSSRRDPVV VSRAMSALVN ANDDSGVVLG NWSGKYENGT SPMAWIGSVA
260 270 280 290 300
ILQQYYKTKK PVSYGQCWVF SGVLTTVMRC LGIPARSVSN FNSAHDTDEN
310 320 330 340 350
LRVDVYLNEK GEKLKWMSSD SVWNFHVWND VWMKRKDLPS GFDGWQAIDA
360 370 380 390 400
TPQEQSQGIF QCGPCPVKAV KDGDVYLPYD SKFVYAEVNA DKVYWRVKEE
410 420 430 440 450
NGRNKYTKLG VESQSIGANI STKAVGQNRR EDITWQYKFP EGSSEERASM
460 470 480 490 500
KRAVSYLQPS GMTPRSRFAA VPLDVNLRNA GDEDTIQNEV VPKSGVQLEI
510 520 530 540 550
TNEKPLCPGN PIEVVITVKS TVAGSWTVDL ASSCQLQSYT GKVHANLGYI
560 570 580 590 600
KQTVKVEGQS EVRVPLKIMP EAYMKALATV DDEEHVHVTA IAEIQGTPEK
610 620 630 640 650
LTKEVSLSFE YPPIQVQMPE TAQVNKDFTC AFIFKNKLNV PLDNCKLMVE
660 670 680 690 700
GLGIFKMATF DEGDIQPGRI IKSEVICTPT RVGEKKIVAR LTSNQVKDIS

VEKGIMVTH
Length:709
Mass (Da):79,055
Last modified:October 19, 2011 - v1
Checksum:iBB52AFD2251623DB
GO

Sequence databases

RefSeqiXP_003207295.1. XM_003207247.2.

Genome annotation databases

EnsembliENSMGAT00000013118; ENSMGAP00000012230; ENSMGAG00000011669.
GeneIDi100541357.

Cross-referencesi

Sequence databases

RefSeqiXP_003207295.1. XM_003207247.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9103.ENSMGAP00000017984.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMGAT00000013118; ENSMGAP00000012230; ENSMGAG00000011669.
GeneIDi100541357.

Organism-specific databases

CTDi7047.

Phylogenomic databases

GeneTreeiENSGT00760000119108.
OrthoDBiEOG7WT40M.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 1 hit.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis."
    Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A., Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K., Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C., Frederickson K.M.
    , Flicek P., Florea L., Folkerts O., Groenen M.A., Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A., de Jong P., Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D., Lee M.K., Lee T., Mane S., Marcais G., Marz M., McElroy A.P., Modise T., Nefedov M., Notredame C., Paton I.R., Payne W.S., Pertea G., Prickett D., Puiu D., Qioa D., Raineri E., Ruffier M., Salzberg S.L., Schatz M.C., Scheuring C., Schmidt C.J., Schroeder S., Searle S.M., Smith E.J., Smith J., Sonstegard T.S., Stadler P.F., Tafer H., Tu Z.J., Van Tassell C.P., Vilella A.J., Williams K.P., Yorke J.A., Zhang L., Zhang H.B., Zhang X., Zhang Y., Reed K.M.
    PLoS Biol. 8:E1000475-E1000475(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiG1NGK7_MELGA
AccessioniPrimary (citable) accession number: G1NGK7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: June 24, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.