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Protein
Submitted name:

Semaphorin 6A

Gene

SEMA6A

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Submitted name:
Semaphorin 6AImported
Gene namesi
Name:SEMA6AImported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
Proteomesi
  • UP000008912 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei645 – 673HelicalSequence analysisAdd BLAST29

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_500341467719 – 1030Sequence analysisAdd BLAST1012

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 512SemaInterPro annotationAdd BLAST489

Sequence similaritiesi

Belongs to the semaphorin family.SAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3611. Eukaryota.
ENOG410XQZC. LUCA.
GeneTreeiENSGT00760000119134.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR002165. Plexin_repeat.
IPR001627. Semap_dom.
IPR036352. Semap_dom_sf.
IPR027231. Semaphorin.
IPR015943. WD40/YVTN_repeat-like_dom.
PANTHERiPTHR11036. PTHR11036. 1 hit.
PfamiView protein in Pfam
PF01437. PSI. 1 hit.
PF01403. Sema. 1 hit.
SMARTiView protein in SMART
SM00630. Sema. 1 hit.
SUPFAMiSSF101912. SSF101912. 1 hit.
PROSITEiView protein in PROSITE
PS51004. SEMA. 1 hit.

Sequencei

Sequence statusi: Complete.

G1MAQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSEALLLYF TLLHFAGAGF PEDSEPISIS HGNYTKQYPV FVGHKPGRNS
60 70 80 90 100
TQRHRLDIQM IMIMNRTLYI AARDHIYTVD MDTSHTEEIY CSKKLTWKSR
110 120 130 140 150
QADVDTCRMK GKHKDECHNF IKVLLKKNDD TLFVCGTNAF NPSCRNYKMD
160 170 180 190 200
TLEPSGDEFS GMARCPYDAK HANIALFADG KLYSATVTDF LAIDAVIYRS
210 220 230 240 250
LGDSPTLRTV KHDSKWLKEP YFVQAVDYGD YIYFFFREIA VEYNTMGKVF
260 270 280 290 300
FPRVAQVCKN DMGGSQRVLE KQWTSFLKAR LNCSVPGDSH FYFNILQAVT
310 320 330 340 350
DVIRINGRDV VLATFSTPYN SIPGSAVCAY DMLDIAHVFT GRFKEQKSPD
360 370 380 390 400
STWTPVPDER VPKPRPGCCA GSSSLEKYAT SNEFPDDTLN FIKTHPLMDE
410 420 430 440 450
AVPSVVNRPW FLRTMVRYRL TKIAVDTTAG PYQNHTVVFL GSEKGIILKF
460 470 480 490 500
LARIGNSGFL NDSLFLEEMN VYNPEKCSYD GVEDKRITGM QLDKASGSLY
510 520 530 540 550
VAFSTCVIKL PLGRCERHGK CKKTCITSRD PYCGWVKEGG SCAHLSPSSR
560 570 580 590 600
LPFEQDIESG NTDGLGDCHN SFVALNGHSS SLLPSTTTSD AAAQEGYESR
610 620 630 640 650
AGMRDWKDLL HSPDSTDSLG AVSSRNHQDK KGVIRESYLK GHDQLVPVTL
660 670 680 690 700
LAIAVILAFV MGAVFSGIIV YCVCDHRRKD VSAVQRKEKE LTHSRRGSMS
710 720 730 740 750
SVTKLSGLFG DTQSKDPKPE AVLTPLMHNG KLATPGNTAK VLIKADQHHL
760 770 780 790 800
DLAALPTPES TPTLQQKRKP SRGSREWERN QNLINACTKD MPPMGSPVIP
810 820 830 840 850
TDLPLRASPS HIPSVVVLPI TQQGYQHEYV DQPKMSEVAQ MALEDQAATL
860 870 880 890 900
EYKTIKEHLS SKSPNHGVNL VENLDSLPPK VPQREASLGP PGASLSQNGL
910 920 930 940 950
SKRLERHHSS SYGLDYKRSY PTNSLTRSHQ ATTLKRNNTN CSNSSHLSRN
960 970 980 990 1000
QSFGRGDNPP PAPQRVDSIQ VHDAQPSGQA VTVSRQPSLN AYNSLTRSGL
1010 1020 1030
KRTPSLKPDV PPKPSLAPLS TSMKPNDACT
Length:1,030
Mass (Da):114,349
Last modified:October 19, 2011 - v1
Checksum:iD809184A2CAFEB52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01091451 Genomic DNA. No translation available.
ACTA01099451 Genomic DNA. No translation available.
RefSeqiXP_019651080.1. XM_019795521.1.

Genome annotation databases

EnsembliENSAMET00000017109; ENSAMEP00000016430; ENSAMEG00000015546.
GeneIDi100472243.

Similar proteinsi

Entry informationi

Entry nameiG1MAQ6_AILME
AccessioniPrimary (citable) accession number: G1MAQ6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 25, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation
The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported