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G1M3J1

- G1M3J1_AILME

UniProt

G1M3J1 - G1M3J1_AILME

Protein
Submitted name:

Uncharacterized protein

Gene

DDX52

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. helicase activity Source: UniProtKB-KW
    3. nucleic acid binding Source: InterPro

    Keywords - Molecular functioni

    HelicaseUniRule annotation, Hydrolase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:DDX52Imported
    OrganismiAiluropoda melanoleuca (Giant panda)Imported
    Taxonomic identifieri9646 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
    ProteomesiUP000008912: Unplaced

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00550000074863.
    KOiK14779.
    OMAiNVDCLHA.
    OrthoDBiEOG7H1JKD.
    TreeFamiTF314448.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    IPR014014. RNA_helicase_DEAD_Q_motif.
    [Graphical view]
    PfamiPF00270. DEAD. 1 hit.
    PF00271. Helicase_C. 1 hit.
    [Graphical view]
    SMARTiSM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    PS51195. Q_MOTIF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G1M3J1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDAHDLFRRL GAGAKFDVRR FSADAARFQV GKRKHEFDSS EVLQGLDFFG    50
    NKKSVPGECG ASRTHQELQD EEKKEESLTE RKREQKKKRK MMMSEITSQE 100
    EGSTIQWISS VEAKIEDKKI KRENKLTSGK LENLRKEKIN FFRNKHKIHV 150
    QGTDLPDPIA TFQQLDQEYK INSRLLQNIL DAGFQMPTPI QMQAIPVMLH 200
    GRELLASAPT GSGKTLAFSI PILMHLKQPT NKGFRALIIS PTRELANQIH 250
    RELVKISEGT GFRIHMIHKA AVAAKKFGPK SSQKFDILVT TPNRLIYLLK 300
    QDPPGIDLTS VEWLVVDESD KLFEDGKTGF RDQLASIFLA CTSHKVRRAM 350
    FSATFAYDVE QWCKLNLDNV ITVSIGARNS AAETVEQELL FVGSETGKLL 400
    AMRELVKKGF NPPVLVFVQS IERAKELFHE LIYEGINVDV IHADRTQQQR 450
    DNTVHSFRAG KIWVLICTAL LARGIDFKGV NLVINYDFPT SSVEYIHRIG 500
    RTGRAGHKGK AVTFFTEDDK PLLRSVANVI QQAGCPVPEY IKGFQKLLSK 550
    QKKKMIKKPL ERDSISTTPK YFLEKAENKR KKVTGQNSKK KAALEDKS 598
    Length:598
    Mass (Da):67,775
    Last modified:October 19, 2011 - v1
    Checksum:i64F3202E98A57C99
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ACTA01108365 Genomic DNA. No translation available.
    RefSeqiXP_002924934.1. XM_002924888.1.

    Genome annotation databases

    EnsembliENSAMET00000014481; ENSAMEP00000013903; ENSAMEG00000013159.
    GeneIDi100472790.
    KEGGiaml:100472790.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ACTA01108365 Genomic DNA. No translation available.
    RefSeqi XP_002924934.1. XM_002924888.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSAMET00000014481 ; ENSAMEP00000013903 ; ENSAMEG00000013159 .
    GeneIDi 100472790.
    KEGGi aml:100472790.

    Organism-specific databases

    CTDi 11056.

    Phylogenomic databases

    GeneTreei ENSGT00550000074863.
    KOi K14779.
    OMAi NVDCLHA.
    OrthoDBi EOG7H1JKD.
    TreeFami TF314448.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
    IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    IPR014014. RNA_helicase_DEAD_Q_motif.
    [Graphical view ]
    Pfami PF00270. DEAD. 1 hit.
    PF00271. Helicase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    PS51195. Q_MOTIF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The sequence and de novo assembly of the giant panda genome."
      Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
      , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
      Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiG1M3J1_AILME
    AccessioniPrimary (citable) accession number: G1M3J1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3