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G1M3J1

- G1M3J1_AILME

UniProt

G1M3J1 - G1M3J1_AILME

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Protein
Submitted name: Uncharacterized protein
Gene
DDX52
Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. helicase activity Source: UniProtKB-KW
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotation, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:DDX52Imported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
ProteomesiUP000008912: Unplaced

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00550000074863.
KOiK14779.
OMAiNVDCLHA.
OrthoDBiEOG7H1JKD.
TreeFamiTF314448.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G1M3J1-1 [UniParc]FASTAAdd to Basket

« Hide

MDAHDLFRRL GAGAKFDVRR FSADAARFQV GKRKHEFDSS EVLQGLDFFG    50
NKKSVPGECG ASRTHQELQD EEKKEESLTE RKREQKKKRK MMMSEITSQE 100
EGSTIQWISS VEAKIEDKKI KRENKLTSGK LENLRKEKIN FFRNKHKIHV 150
QGTDLPDPIA TFQQLDQEYK INSRLLQNIL DAGFQMPTPI QMQAIPVMLH 200
GRELLASAPT GSGKTLAFSI PILMHLKQPT NKGFRALIIS PTRELANQIH 250
RELVKISEGT GFRIHMIHKA AVAAKKFGPK SSQKFDILVT TPNRLIYLLK 300
QDPPGIDLTS VEWLVVDESD KLFEDGKTGF RDQLASIFLA CTSHKVRRAM 350
FSATFAYDVE QWCKLNLDNV ITVSIGARNS AAETVEQELL FVGSETGKLL 400
AMRELVKKGF NPPVLVFVQS IERAKELFHE LIYEGINVDV IHADRTQQQR 450
DNTVHSFRAG KIWVLICTAL LARGIDFKGV NLVINYDFPT SSVEYIHRIG 500
RTGRAGHKGK AVTFFTEDDK PLLRSVANVI QQAGCPVPEY IKGFQKLLSK 550
QKKKMIKKPL ERDSISTTPK YFLEKAENKR KKVTGQNSKK KAALEDKS 598
Length:598
Mass (Da):67,775
Last modified:October 19, 2011 - v1
Checksum:i64F3202E98A57C99
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
ACTA01108365 Genomic DNA. No translation available.
RefSeqiXP_002924934.1. XM_002924888.1.

Genome annotation databases

EnsembliENSAMET00000014481; ENSAMEP00000013903; ENSAMEG00000013159.
GeneIDi100472790.
KEGGiaml:100472790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
ACTA01108365 Genomic DNA. No translation available.
RefSeqi XP_002924934.1. XM_002924888.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSAMET00000014481 ; ENSAMEP00000013903 ; ENSAMEG00000013159 .
GeneIDi 100472790.
KEGGi aml:100472790.

Organism-specific databases

CTDi 11056.

Phylogenomic databases

GeneTreei ENSGT00550000074863.
KOi K14779.
OMAi NVDCLHA.
OrthoDBi EOG7H1JKD.
TreeFami TF314448.

Family and domain databases

Gene3Di 3.40.50.300. 2 hits.
InterProi IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view ]
Pfami PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view ]
SMARTi SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence and de novo assembly of the giant panda genome."
    Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
    , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
    Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiG1M3J1_AILME
AccessioniPrimary (citable) accession number: G1M3J1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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