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Protein
Submitted name:

Nucleoporin 50

Gene

NUP50

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 50Imported
Gene namesi
Name:NUP50Imported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
Proteomesi
  • UP000008912 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000009539.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini341 – 461RanBD1InterPro annotationAdd BLAST121

Phylogenomic databases

eggNOGiKOG2724. Eukaryota.
ENOG410YPHB. LUCA.
GeneTreeiENSGT00440000035348.
InParanoidiG1LR55.
KOiK14295.
OMAiTFLFHGN.
OrthoDBiEOG091G0HML.
TreeFamiTF106504.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiView protein in InterPro
IPR015007. NUP2/50/61.
IPR011993. PH-like_dom_sf.
IPR000156. Ran_bind_dom.
PfamiView protein in Pfam
PF08911. NUP50. 1 hit.
PF00638. Ran_BP1. 1 hit.
SMARTiView protein in SMART
SM00160. RanBD. 1 hit.
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiView protein in PROSITE
PS50196. RANBD1. 1 hit.

Sequencei

Sequence statusi: Complete.

G1LR55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRVAEKEL TDRNWDQDDA AEEVGTFSVA SEEVLKNRAI KKAKRRNVGF
60 70 80 90 100
ESDSGGAFKG FKGLVVPSGG GGFSGFGNGA GGKPLEGLSN GSGVTSAPPF
110 120 130 140 150
SSARAATESK AAFGSVAANG PTSLVDKKIL TPKTNGDSQQ PSSSGLTSSA
160 170 180 190 200
ACPRNAYHKQ LAALNCSVRD WIAKHVDTNP LCDLTPIFKD YEKYLAGIEQ
210 220 230 240 250
QHGSSGSRSS ESETNKMPLA TQSPSLFGST KLQQDSPFPF AGNKVEDTSE
260 270 280 290 300
KKTDPSVGAA SASFNFGKKI DSSVLGSLNS GPLTGFSFSS GNSSLFGKDL
310 320 330 340 350
TQNKPVSSPF PTKTLEVHAE GGSSEYKGGD DEESDEPPKV VVTEVKEEDA
360 370 380 390 400
FYSKKCKLFY KKDNEFKEKG VGTLHLKPTA NQKTQLLVRA DTSLGNILLN
410 420 430 440 450
VLIPPNMPCT RTGKNNVLIV CVPNPPIDEK NATSPVTMLI RVKTGEDADE
460
LHTILLEKKD G
Length:461
Mass (Da):48,879
Last modified:October 19, 2011 - v1
Checksum:iBB6CE2442709E76E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01168539 Genomic DNA. No translation available.
RefSeqiXP_002922961.1. XM_002922915.3.
XP_011227816.1. XM_011229514.2.

Genome annotation databases

EnsembliENSAMET00000009951; ENSAMEP00000009539; ENSAMEG00000009067.
GeneIDi100474401.
KEGGiaml:100474401.

Similar proteinsi

Entry informationi

Entry nameiG1LR55_AILME
AccessioniPrimary (citable) accession number: G1LR55
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 22, 2017
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported