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Protein
Submitted name:

Uncharacterized protein

Gene

SRCAP

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SRCAPImported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
Proteomesi
  • UP000008912 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000008206.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 196HSAInterPro annotationAdd BLAST73
Domaini641 – 806Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini2059 – 2212Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili496 – 523Sequence analysisAdd BLAST28
Coiled coili532 – 554Sequence analysisAdd BLAST23
Coiled coili2340 – 2367Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
COG0553. LUCA.
GeneTreeiENSGT00530000063427.
InParanoidiG1LMH1.
OMAiENDGFPA.
OrthoDBiEOG091G045T.
TreeFamiTF106424.

Family and domain databases

InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
PRINTSiPR00929. ATHOOK.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.

Sequencei

Sequence statusi: Complete.

G1LMH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQSSPSPAHP QLPILQTQMV SDGMTGSNPV SPASSSSPAS SGAGGISPQH
60 70 80 90 100
IAQDSSLDGP PGPPDGATVP LEGLSLPQAA DLANKGPKWE KSHAEIAEQA
110 120 130 140 150
KHEAEIETRI AELRKEGFWS LKRLPKVPEP PRPKGHWDYL CEEMQWLSAD
160 170 180 190 200
FAQERRWKRG VARKVVRMVI RHHEEQRQKE ERARREEQAK LRRIASTMAK
210 220 230 240 250
DVRQFWSNVE KVVQFKQQSR LEEKRKKALD LHLDFIVGQT EKYSDLLSQS
260 270 280 290 300
LNQPLASSKA GSSPCLGSSS AASSPPPLVS RLDDEAIDGD FQPQEEEEDD
310 320 330 340 350
EETIEVEEQQ EGNDAETQRR EIELLRREGE LPLEELLRSL PPQLLGGPSS
360 370 380 390 400
PSRTPSSRDS DTRDGPEEGG EEEPSQVLQV KPPPSVTQRN KQPWHPDEDD
410 420 430 440 450
EEFTANEDEA EDEEDTIAAE EQLEGEVDHA MELSELAREG GELSVEELLQ
460 470 480 490 500
RYAGAYASDA SAPGSGTSED EDEDEGEADS SDCEPEGATE AEEAPREDSS
510 520 530 540 550
SQSESAEEQS EEEEDEHSED EETSGTSESE ESESEESEES RSQSQADEEE
560 570 580 590 600
EEEEEEDDFG VEYLLARDEE QSEADGGSGP PTPGPATTLG PKKEITDIAA
610 620 630 640 650
AAESLQPKGY TLATTQVKTP IPLLLRGQLR EYQHIGLDWL VTMYEKKLNG
660 670 680 690 700
ILADEMGLGK TIQTISLLAH LACEKGNWGP HLIIVPTSVM LNWEMELKRW
710 720 730 740 750
CPSFKILTYY GAQKERKLKR QGWTKPNAFH VCITSYKLVL QDHQAFRRKN
760 770 780 790 800
WRYLILDEAQ NIKNFKSQRW QSLLNFNSQR RLLLTGTPLQ NSLMELWSLM
810 820 830 840 850
HFLMPHVFQS HREFKEWFSN PLTGMIEGSQ EYNEGLVKRL HKVLRPFLLR
860 870 880 890 900
RVKVDVEKQM PKKYEHVIRC RLSKRQRCLY DDFMAQTTTK ETLATGHFMS
910 920 930 940 950
VINILMQLRK VCNHPNLFDP RPVTSPFITP GICFSTASLV LRATDVHPLQ
960 970 980 990 1000
QRIDMGRFDL IGLEGRVSRY EADTFLPRHR LSRRVLLEVA TAPDPPPRPK
1010 1020 1030 1040 1050
PVKMKVNRML QPMPKQEGRT VVVVNSPRTP LGPVPVRPPP GPELSTQPTP
1060 1070 1080 1090 1100
GPTPPVLPAP LMVSASPVGP PLIPASRPPG PVLLPPLQPN SGPLPQVLPS
1110 1120 1130 1140 1150
PLGVLSGTSR PPTPTLSLKP APPAPVRLSP APPPGSSSLL KPLTVPPGYT
1160 1170 1180 1190 1200
FPSAAATTTS TTTATAPTTA VPASTPAPQR LILSPDMQAR LPSGEVVSIG
1210 1220 1230 1240 1250
QLASLAQRPV ASAGGSKPLT FQIQGNKLTL TGAQVRQLAV GQPRPLQRNV
1260 1270 1280 1290 1300
VHLVSAGGQH HLISQPAHVA LIQAVAPTPG PTPVSVLPSS TPSTTLAPTG
1310 1320 1330 1340 1350
LSLPLAANQV PPTMVNNTGV VKIVVRQAPR DGLTPVPPLA PAPRPPSSGL
1360 1370 1380 1390 1400
PAMLTPRPTL TPGRLPTPTL GTARAPIPTS TLVRPLLKLV HSPSPEVTAS
1410 1420 1430 1440 1450
APGAAPLTIS SPLPVQSSLP GPASSPMPVP SSSPLASPVS STVSVPVASS
1460 1470 1480 1490 1500
LPISVSTTPP APASGPLPVP ISAPLPISAS GPALLTNVTP ALAPVVSAAP
1510 1520 1530 1540 1550
GPPSLAPAGA SSSASALTLG LATTPSLSSS QAPGHPLLLA PASSHVPGLN
1560 1570 1580 1590 1600
SAVAPACSPV LVPASALASP FPAAPNPAPA QASLLAPAPS ASQALATSLA
1610 1620 1630 1640 1650
PMVAPQTAIL APSPAPSLAP LPVLAPSPGP APLLAPSQTP VPVLASSSTP
1660 1670 1680 1690 1700
GTSLASASSL VPAPTPVLAP SSTQTMVPAP VPSPLPSPAS TQTLALAPAL
1710 1720 1730 1740 1750
ASSLGGSSPS HTLSLGTGNP QGPFPAQTLS LTPASSLVPA PAQTLSLAPG
1760 1770 1780 1790 1800
PPLGPSQTLS LTPAPPLTPA SPMGPAPAHT LTLAPVSSSA SLLTPASVQT
1810 1820 1830 1840 1850
LTLSPAPVPV PTLGPAAAQT LALAPVSTQA PASQTSSLVV SASGAAPLPV
1860 1870 1880 1890 1900
TMVSRLPVSK DEPETLTLRP GPPSPPSTAT SFSGPRPRRQ PPPPPRSPFY
1910 1920 1930 1940 1950
LDSLEEKRKR QRSERLERIF QLSEAHGALA PVYGTEVLDF CTLPQPVASP
1960 1970 1980 1990 2000
IGPRSPGPSH PTFWTYTEAA RQAVLFPQQR LDQLSEIIER FIFVMPPVEA
2010 2020 2030 2040 2050
PPPSLHACHP PPWLAPRQAA FQEQLACELW PRARPLHRIV CNMRTQFPDL
2060 2070 2080 2090 2100
RLIQYDCGKL QTLAVLLRQL KAEGHRVLIF TQMTRMLDVL EQFLTYHGHL
2110 2120 2130 2140 2150
YLRLDGSTRV EQRQALMERF NADKRIFCFI LSTRSGGVGV NLTGADTVVF
2160 2170 2180 2190 2200
YDSDWNPTMD AQAQDRCHRI GQTRDVHIYR LISERTVEEN ILKKANQKRM
2210 2220 2230 2240 2250
LGDMAIEGGN FTTAYFKQQT IRELFDMPLE EPSGSSAPSA LEEEEETVAS
2260 2270 2280 2290 2300
KQTHILEQAL CRAEDEEDIR AATQAKAEQV AELAEFNEND GFPAGEGEEA
2310 2320 2330 2340 2350
SRPGAEDEEM SRAEQEIAAL VEQLTPIERY AMKFLEASLE EVSREELKQA
2360 2370 2380 2390 2400
EEQVEAARKD LDQAKEEVFR LPQEEEEGPG AGDEVSCGTG GGSHRRSKKA
2410 2420 2430 2440 2450
KAPERPGTRV SERLRGARAE TQGANHTPVT STHHTRSTST PPRCSPARER
2460 2470 2480 2490 2500
VPRPAPRPRP TPASAPAVIP APIPVPIPAP IPISAPNPIT MLPVHILPSP
2510 2520 2530 2540 2550
PLPPSQIPPS CSSACTPPPA CTPPPAHTPP PTQTSLSTPS SPLLLGLPSV
2560 2570 2580 2590 2600
PVSPPVTNLP LGLGPETELC AQALVSTESP ELADMASSET SPLTLVPPKD
2610 2620 2630 2640 2650
LLPVAVEILP ISEKNLSLAS SAPSPTLEAD SVPNGQEQEV PEPAEGTILT
2660 2670 2680 2690 2700
VLPDGEEVPS CLSESNGLDL PPSAASDELL LEPLEADKSS EELVEAQTPT
2710 2720 2730 2740 2750
SSPEKPQELV SAEVAAPSTS SSATSSPESP SPARPPRRRT SADVEIRGQG
2760 2770 2780 2790 2800
AGRPGQPPGP KVLRKLPGRL VTVVEEKELV RRRRQQRGTA SILVPGVSET
2810 2820 2830 2840 2850
GASPGSPSAR SMSGPESSPP TSGPCEAAPP STLPTPTQQP FIARRRIELG
2860 2870 2880 2890 2900
VTGGGSPENG EGPLLAITPP AVKRRRGRPP KKNRSPADAG RGVDEVPSST
2910 2920 2930 2940 2950
CKGKTNGADP VPGAETLIVA EPVLGPQLSP GPQPLGPQPI HRPEPIILSP
2960 2970 2980 2990 3000
VEKRRRGRPP KARDLPIPGT ISSPGDGNLE SRTQPLPLPP PLPPLPPLLA
3010 3020 3030 3040 3050
CPTATVANTV TNLTISASPP KRKRGRPPKN PPSPRPSQLP VLDRDSSSVL
3060 3070 3080 3090 3100
ESCGLGRRRQ PQGQGESEGS SSDEDGSRPL TRLARLRLEA EGMRGRKSEG
3110 3120 3130 3140 3150
SMVVAVIQDD LDLADSGPGG LELTPPVVSL APKLRSTRLR PGSLVPPLET
3160 3170 3180 3190 3200
EKVPRKRAGA PVAGGPGLAK RGRLQPPSPL GPEGSVEESE AEASGEEEEG
3210 3220 3230 3240
DGTPRRRPGP RRLGGATNQG DQRILRSSAP PHLAGPTISH RGRKAKT
Length:3,247
Mass (Da):345,439
Last modified:October 19, 2011 - v1
Checksum:i2716B2BD9032C75D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01177880 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSAMET00000008547; ENSAMEP00000008206; ENSAMEG00000007778.

Similar proteinsi

Entry informationi

Entry nameiG1LMH1_AILME
AccessioniPrimary (citable) accession number: G1LMH1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 12, 2017
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported