G1LHP6 (G1LHP6_AILME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Uncharacterized protein Ensembl ENSAMEP00000006442
Organism	Ailuropoda melanoleuca (Giant panda) [Reference proteome] Ensembl ENSAMEP00000006442
Taxonomic identifier	9646 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda

Protein attributes

Sequence length	2824 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 6 PDZ (DHR) domains. RuleBase RU003354
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSAMEP00000006442

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G1LHP6 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: 51475F689B346AA0	FASTA	2,824	297,740
	10 20 30 40 50 60 MPITQDNAVL HLPLLYQWLQ NSLREGGDGP EQRLCQAAIQ KLQEYIQLNF AVDESAVPPD 70 80 90 100 110 120 HSPPGMEICT VYLTKELGDT ETVGLSFGNI PVFGDYGEKR RGGKKRKTHQ GPVLDVGCIW 130 140 150 160 170 180 VTELRKNSPA GKSGKVRLRD EILSLNGQLM VGVDVSGASY LAEQCWNGGF IYLTMLRRFK 190 200 210 220 230 240 HKVHSPNDGN GSSSSEPGDT PALELGDQTV KKGKRARKFG VISRPSTQKA TEETKSSPGC 250 260 270 280 290 300 ELDNDPISEL DNGPDPELGN GHAFELENGP ESLKELAGSH LDSSEADRGT EHSIPKTDAS 310 320 330 340 350 360 LPTSNDKRRF SKSGKTDFQS SDCLAREEVG RIWKMELLKE SDGLGIQVSG GRGSKRSPHA 370 380 390 400 410 420 IVVTQVKEGG AAHRDGRLSL GDELLVINGH LLVGLSHEEA VAILRSATGM VQLVVASKEN 430 440 450 460 470 480 SAEDLLRLTS KSLPDLTSSV EDVSSWTDNE DQEADGEEDE GPGSSSVRGA MPGTDEPQDA 490 500 510 520 530 540 GGPEESKGNL ESPKQGSSKL KLKSRLSGGV HRLESVEEYN ELMVRNGDPR IRMLEVSRDG 550 560 570 580 590 600 RKHSLPQLLD STGTSQEYHI VKKSTRSLST TQVESPWRLI RPSVISIIGL YKEKGKGLGF 610 620 630 640 650 660 SIAGGRDCIR GQMGIFVKTI FPNGSAAEDG RLKEGDEILD VNGIPIKGLT FQEAIHTFKQ 670 680 690 700 710 720 IRSGLFVLTV RTKLLSPSLT PCSTPTHMSR SSSPSFSTSG GSSAAGSDEG SSSSLGRKAP 730 740 750 760 770 780 GPKDRIVMEV TLNKEPRVGL GIGACCLALE NSPPGIYIHS LAPGSVAKME SSLSRGDQIL 790 800 810 820 830 840 EVNSVNVRHA ALSKVHTILS KCPPGPVRLV IGRHPNPKVS EQEMDAVIAR STYQESKEAS 850 860 870 880 890 900 SSPGSGTPLK SPSLAKKDAL ISEPEASLDF AHSVPGSLSD FVVAGSEDED APGSGCSTSE 910 920 930 940 950 960 DGGPPPSTCA HKEPGKPRAN SLVTLGSQRT SGLFHKQVTV ARQASLPGSP QVLRNPLLRQ 970 980 990 1000 1010 1020 RRVGCYDTED ASDEEEFGGE GDCISLPGTL PGPSRPLTEN DSRHVLMTSS KVMCINSQGE 1030 1040 1050 1060 1070 1080 HPQKTVVSKA SSVPLLGSSL DLEESVPEGL GDTPSHAANL LASAKAPKGG PGCSGRKELS 1090 1100 1110 1120 1130 1140 GSRSSPKLEY KADTGAQSLG NTDTPRSAQQ KNDSLASRHK PVARVSPHHK RPEADARPSS 1150 1160 1170 1180 1190 1200 SETAHLTDGG DGSCVQATSI KETRTGSPPG GTVEKESLGK LTVGDGCAPA NWGPASALPH 1210 1220 1230 1240 1250 1260 PDAGRCTENV FEAAPEQGQK PGTGPDGSPD LVPTPGQKGA SHPDPSKTSV DTGQARWPEE 1270 1280 1290 1300 1310 1320 PGEPVSPRVP ESEDRCQVRL APERSSPPGK MAAARHDFSN TPAAPEADSP KKAAAHRGGP 1330 1340 1350 1360 1370 1380 EAKGASPAST VLSQDLMSQE ERQRVPGNHS KALQTTGVLV PENSQGSALL KGTDCVSERA 1390 1400 1410 1420 1430 1440 PQASPTLPSA ADKAGRVCGS VSGHCCPREG GGSPVTDIDK LIKELDASEP RLQSPQKGDR 1450 1460 1470 1480 1490 1500 LSQEGHSQGQ PPAGAGSGSS HPAGPVMGNQ TPTLRRAWAA AGQPPHPQWA SQPSVLDSIN 1510 1520 1530 1540 1550 1560 PDKHFTVNKN FLSNYSRNFS NFHEDSLSLS GPGDSTEPSL SSMYGDAEDS SSDPESLTEA 1570 1580 1590 1600 1610 1620 PQASTGDNWS PPHSRGSSHK EDTTESEEEQ IEICSTNGSP NPPSTTAHAP AQAAPSPVLA 1630 1640 1650 1660 1670 1680 KVLPLKHSAL SQVVGNPCER ASFVPGTSCP PIPDSSQPFS LLDISSREHE LHADRRILHY 1690 1700 1710 1720 1730 1740 PRPLCEEGTL VSTSPSSAVE NGQPPKAARH FHNLPVTLSN LNMVNGLEHD LLGDKTPNKK 1750 1760 1770 1780 1790 1800 QETNVNATEN RSPFSVDVPK NGRSVLTNLH ISESQDMEDV LQKPKLTSRR PIMAWFKEIN 1810 1820 1830 1840 1850 1860 KNSHGTHAQG KAEKEQPTGP ARSPDSKSQG SSSSHKKGVA GLQSPPQLKL SLENKDPPKK 1870 1880 1890 1900 1910 1920 GSAETLLNNC QKPKSGPKLK RLSIKSKSKA TWEAPAAPVV KAGGPDPRRP LTSPQTSHRM 1930 1940 1950 1960 1970 1980 LPKGAAHLLH TEEHEEPDKN GLALPRPPQS VLESRPPAAS GAPKPRASET SVTAFVSPHT 1990 2000 2010 2020 2030 2040 SPKAVPEQGA CRRAHAAFHS EPDGACQPPG CGPEGRAPPV ASGSSASMAA IGQGALRGSS 2050 2060 2070 2080 2090 2100 QADPAPGAAQ AGPSSDKGSN AIAGDPLERT NQLKIVDISC ERMPKNACGD QPAESDRLGG 2110 2120 2130 2140 2150 2160 FWAHSNCQEK SGVRPCHQSL EPSPNHPSSL PSRASQVEQD PQRSFSVAKL ASSCSSPQLP 2170 2180 2190 2200 2210 2220 AKTADSSPAK ASQASGSLGL PKNGTPAGPA PDDHPYFTPR PATRTYSMPA QFSSHFGREG 2230 2240 2250 2260 2270 2280 HALHSPGRSH RDSQTPATSG GLLEAKASRG GVLGLANGQG IYSVKPLLET SRNLPTTDEG 2290 2300 2310 2320 2330 2340 DVLSVQERSC LVTDKIRVTR RHYCPEQNYE STSFFSVKQR IKSFENLAHS DRLGAKSGAS 2350 2360 2370 2380 2390 2400 PFLSVSSKPP IGRRSSGSIV SGSLSHPVDP TVRSLRRSLS SCSESQSEAS SLIPQMTKSP 2410 2420 2430 2440 2450 2460 SSTTLTLSRQ NPAEASNKGP DSDPKKPLGP SGSPTPSVTP ASPVKRNKSS VRHTQPSPLS 2470 2480 2490 2500 2510 2520 RSKLQELRAL SMPDLDKLCS EDFSAGPTAV LFKTELEIVP RRSLGSPAGG LNGATALSCP 2530 2540 2550 2560 2570 2580 MKRGDRACPG GSSPKASEPG VPSSAHHVGE TSRDLPSGKG WSVNLDQLLI SAGDQQRLQS 2590 2600 2610 2620 2630 2640 VLSSVGSKST ILTLIQEAKA QSENKEDVCF IVLNKKEGSG LGFTVAGGTD VEPKSVVVHR 2650 2660 2670 2680 2690 2700 VCSQGAASQE GIVNRGDFLL SVNGTSMAGL AHGDVLKILH QAQLHRDVLV VIKKGNDQPR 2710 2720 2730 2740 2750 2760 SSSRQEANGK GSLSRKPSPL EPSIGRSVPS HDALCVEVLK TSAGLGLSLD GGKSSMAGDG 2770 2780 2790 2800 2810 2820 PLFIKRVYKG GAAEQAGTIE AGDEILAING KPLVGLMHFD AWNIMKSVPE GPVQLVIRKH RNSS

References

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[1]	"The sequence and de novo assembly of the giant panda genome." Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J. Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (SEP-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ACTA01179560 Genomic DNA. No translation available. ACTA01187558 Genomic DNA. No translation available. ACTA01195556 Genomic DNA. No translation available.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSAMET00000006709; ENSAMEP00000006442; ENSAMEG00000006091.
Phylogenomic databases
GeneTree	ENSGT00700000104234.
OMA	QNWPHES.
Family and domain databases
InterPro	IPR001478. PDZ. [Graphical view]
Pfam	PF00595. PDZ. 5 hits. [Graphical view]
SMART	SM00228. PDZ. 6 hits. [Graphical view]
SUPFAM	SSF50156. PDZ. 6 hits.
PROSITE	PS50106. PDZ. 6 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G1LHP6_AILME

Accession

Primary (citable) accession number: G1LHP6

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)