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G0W3G4 (G0W3G4_NAUDC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length765 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
G0W3G4 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: B2183F7D9EE8185B

FASTA76585,961
        10         20         30         40         50         60 
MLRQLGTTRI LLPNLRPIRY ITMPPATPSS SSSSSSSSAR ENNVSKGRKQ QATLGRFFSS 

        70         80         90        100        110        120 
INHKKPTKDT ALKNESKEET KEENKDDSDS IPRKKIRLST SSSSPSIMAE SKPKSPIKLN 

       130        140        150        160        170        180 
TERSSSPASA SASTTPTPIV ADHTLDPKTA VSKPFLCAIP YKEVCQLFQE IETTSSRLSI 

       190        200        210        220        230        240 
IKLCSDFLIK IMKQDPQNLI PVTYLFINKL GPDYEPGLEL GLGEGLLMKT ISESCGKSLT 

       250        260        270        280        290        300 
QIRAQYRELG DLGQIALEAR NVQPTMFKPK PLTVGEVFNN LKMIAKAAGK DSQTKKIKLI 

       310        320        330        340        350        360 
KRMLTACEDG VEAKFLIRSL ESKLRIGLAE KTVLISLSKA LLVKEFDANK DFDMELLETA 

       370        380        390        400        410        420 
EGKIRDAFCQ VPNYEIVINS CLQYGIMNLN EHCSLRPGIP LKPMLAKPTK AINEILDRFQ 

       430        440        450        460        470        480 
GETFTSEYKY DGERAQVHLL EDGTMRIYSR NGENMTERYP EIHIGDFVKD RNETKTLILD 

       490        500        510        520        530        540 
CEAVAWDKEQ QKILPFQVLS TRKRKDVLAK DVKVRVCLFA FDILCHNSNK LINYSLKERR 

       550        560        570        580        590        600 
EILHRVTTPA PGEFQYATEL TTSNLDELQK FLDQSVNDSC EGLMVKMLEG EESHYEPSKR 

       610        620        630        640        650        660 
SRNWLKLKKD YLEGIGDSLD LCVLGAYYGR GKRTGTYGGF LLGCYNDNTG EFETCCKIGT 

       670        680        690        700        710        720 
GFSDEMLQQL HEKLKATVID GPKATYIYDS SAEPDVWFEP SLLFEVLTAD LSLSPIYKAG 

       730        740        750        760 
SSAYDKGVSL RFPRFIRIRE DKGVEDATSS EQIIELYENQ SHRSS 

« Hide

References

[1]"Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents."
Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P., Wolfe K.H.
Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE580267 Genomic DNA. Translation: CCD22352.1.
RefSeqXP_003667595.1. XM_003667547.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11494225.
KEGGndi:NDAI_0A01940.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0W3G4_NAUDC
AccessionPrimary (citable) accession number: G0W3G4
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 13, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)