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Protein
Submitted name:

Glutamate decarboxylase

Gene

shmt1

Organism
Paenibacillus polymyxa M1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPPOL1052684:GLI7-3351-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Name:shmt1Imported
ORF Names:PPM_p0044Imported
Encoded oniPlasmid pPPM1aImported
OrganismiPaenibacillus polymyxa M1Imported
Taxonomic identifieri1052684 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000001644: Plasmid pPPM1a

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

G0W1S3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSNLTALWIA RNVALRNQDT DVERDGYALA LHKNGYQRGV IIGSSLMHYS
60 70 80 90 100
FDKAADVLGL GSDGVIRIDC DSRGRIDLVK LEKEIKACQK RGDRILALIG
110 120 130 140 150
IAGTTESGAI DPLLGMAELA RTSDIHFHVD AAWGGPLLMS DVHARKLRGI
160 170 180 190 200
ERANTVTIDG HKQMYLPMGI GILLIKDPHA AARIEKTARY ILRGGSLDLG
210 220 230 240 250
RHSMEGSRSA MSVYMHAGLY LLGREGYGYL LDEGIRKTHW MAKLLASHPA
260 270 280 290 300
FELIGEPEIN ILTYRYIPAS LREAVRSCTL RPEEHDRINR FNELLQEMQS
310 320 330 340 350
QQGDSFVSRT TLCGIEGMPK SVVVLRVILA NPLTTEAHIQ SVLKIQQEIA
360
KDLELSFEYN TNR
Length:363
Mass (Da):40,370
Last modified:October 19, 2011 - v1
Checksum:iA03A2EEFB85FD8F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE577055 Genomic DNA. Translation: CCC86194.1.
RefSeqiYP_005960901.1. NC_017543.1.

Genome annotation databases

EnsemblBacteriaiCCC86194; CCC86194; PPM_p0044.
GeneIDi12552182.
KEGGippo:PPM_p0044.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE577055 Genomic DNA. Translation: CCC86194.1.
RefSeqiYP_005960901.1. NC_017543.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC86194; CCC86194; PPM_p0044.
GeneIDi12552182.
KEGGippo:PPM_p0044.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciPPOL1052684:GLI7-3351-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
    Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
    J. Bacteriol. 193:5862-5863(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M1Imported.

Entry informationi

Entry nameiG0W1S3_PAEPO
AccessioniPrimary (citable) accession number: G0W1S3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.