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G0W116

- G0W116_PAEPO

UniProt

G0W116 - G0W116_PAEPO

Protein

Beta-galactosidase

Gene

pbg

Organism
Paenibacillus polymyxa M1
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei111 – 1111SubstrateUniRule annotation
    Metal bindingi115 – 1151ZincUniRule annotation
    Binding sitei149 – 1491Substrate
    Active sitei150 – 1501Proton donorUniRule annotation
    Metal bindingi155 – 1551ZincUniRule annotation
    Metal bindingi157 – 1571ZincUniRule annotation
    Metal bindingi160 – 1601ZincUniRule annotation
    Active sitei307 – 3071NucleophileUniRule annotation
    Binding sitei315 – 3151Substrate

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Ligandi

    Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciPPOL1052684:GLI7-1917-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Name:pbgImported
    ORF Names:PPM_1830Imported
    OrganismiPaenibacillus polymyxa M1Imported
    Taxonomic identifieri1052684 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000001644: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliG0W116.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    KOiK12308.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G0W116-1 [UniParc]FASTAAdd to Basket

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    MISSKLPKVF YGGDYNPEQW DEATHQEDLR MFRQAGIDIA TLNVFSWAKI    50
    QSDEITYHFE WLDQLIDNLY ESDIFVCLAT STAAHPAWMA TRYPDILRVD 100
    ADGRKRKFGG RHNSCPNSPT YRKYAEQMAD RLAERYKDHP AILVWHVSNE 150
    YGGDCYCDNC AAAFRVWLKQ KYESLEELNR VWNTSFWGHT FYDWDEIVPP 200
    NNLSEHWGEN HSTFQGISLD YARFNSDSML DCYLLEYNAI KKHIPDAVVT 250
    TNLMGFFKQL DYFKWAKHMD IVSWDSYPGA NTPISYTAMA HDLMRGLKDG 300
    QPFMLMEQTP SQQNWQAYNS LKRPGVMRLW SYQAVAHGAD TVMFFQLRRS 350
    IGACEKFHGA VIEHAGHENT RVFREVAQLG NELGALGNTL LDATVHAKVA 400
    ILFDWDNWWA LEKSSGPSVA LKYLDQVHKY YATLFRRNVQ VDLISVDTDF 450
    QKYDLIIAPV LYMVKPSTAE KLEQFTERGG TFLTTFFSGI VNENDLVTTG 500
    GYPGKLRNLL GIWVEEIDAL LPESHNRIIL KEKVGVLEGE YKCGLLCDLL 550
    HSEGAEVLAE YGDDFYQGMP VLTRNRFGQG EAWYVATDPE EPFLDGLLGY 600
    ICEQKGISSL LRAPAGIEAT MRSKDGKSYL FVLNHNAQTQ QYHLDDQKGK 650
    ELISGKFLEG DICIEGYGFQ VLELS 675
    Length:675
    Mass (Da):77,203
    Last modified:October 19, 2011 - v1
    Checksum:i058EC47D600A3EBC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577054 Genomic DNA. Translation: CCC84767.1.
    RefSeqiWP_013370620.1. NC_017542.1.
    YP_005959474.1. NC_017542.1.

    Genome annotation databases

    EnsemblBacteriaiCCC84767; CCC84767; PPM_1830.
    GeneIDi12550533.
    KEGGippo:PPM_1830.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577054 Genomic DNA. Translation: CCC84767.1 .
    RefSeqi WP_013370620.1. NC_017542.1.
    YP_005959474.1. NC_017542.1.

    3D structure databases

    ProteinModelPortali G0W116.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCC84767 ; CCC84767 ; PPM_1830 .
    GeneIDi 12550533.
    KEGGi ppo:PPM_1830.

    Phylogenomic databases

    KOi K12308.

    Enzyme and pathway databases

    BioCyci PPOL1052684:GLI7-1917-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
      Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
      J. Bacteriol. 193:5862-5863(2011)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M1Imported.

    Entry informationi

    Entry nameiG0W116_PAEPO
    AccessioniPrimary (citable) accession number: G0W116
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3