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G0W116 (G0W116_PAEPO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084

Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Name:pbg EMBL CCC84767.1
ORF Names:PPM_1830 EMBL CCC84767.1
OrganismPaenibacillus polymyxa M1 [Complete proteome] EMBL CCC84767.1
Taxonomic identifier1052684 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length675 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1501Proton donor By similarity PIRSR PIRSR001084-1
Active site3071Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1151Zinc By similarity PIRSR PIRSR001084-3
Metal binding1551Zinc By similarity PIRSR PIRSR001084-3
Metal binding1571Zinc By similarity PIRSR PIRSR001084-3
Metal binding1601Zinc By similarity PIRSR PIRSR001084-3
Binding site1111Substrate By similarity PIRSR PIRSR001084-2
Binding site1491Substrate By similarity PIRSR PIRSR001084-2
Binding site3151Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
G0W116 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 058EC47D600A3EBC

FASTA67577,203
        10         20         30         40         50         60 
MISSKLPKVF YGGDYNPEQW DEATHQEDLR MFRQAGIDIA TLNVFSWAKI QSDEITYHFE 

        70         80         90        100        110        120 
WLDQLIDNLY ESDIFVCLAT STAAHPAWMA TRYPDILRVD ADGRKRKFGG RHNSCPNSPT 

       130        140        150        160        170        180 
YRKYAEQMAD RLAERYKDHP AILVWHVSNE YGGDCYCDNC AAAFRVWLKQ KYESLEELNR 

       190        200        210        220        230        240 
VWNTSFWGHT FYDWDEIVPP NNLSEHWGEN HSTFQGISLD YARFNSDSML DCYLLEYNAI 

       250        260        270        280        290        300 
KKHIPDAVVT TNLMGFFKQL DYFKWAKHMD IVSWDSYPGA NTPISYTAMA HDLMRGLKDG 

       310        320        330        340        350        360 
QPFMLMEQTP SQQNWQAYNS LKRPGVMRLW SYQAVAHGAD TVMFFQLRRS IGACEKFHGA 

       370        380        390        400        410        420 
VIEHAGHENT RVFREVAQLG NELGALGNTL LDATVHAKVA ILFDWDNWWA LEKSSGPSVA 

       430        440        450        460        470        480 
LKYLDQVHKY YATLFRRNVQ VDLISVDTDF QKYDLIIAPV LYMVKPSTAE KLEQFTERGG 

       490        500        510        520        530        540 
TFLTTFFSGI VNENDLVTTG GYPGKLRNLL GIWVEEIDAL LPESHNRIIL KEKVGVLEGE 

       550        560        570        580        590        600 
YKCGLLCDLL HSEGAEVLAE YGDDFYQGMP VLTRNRFGQG EAWYVATDPE EPFLDGLLGY 

       610        620        630        640        650        660 
ICEQKGISSL LRAPAGIEAT MRSKDGKSYL FVLNHNAQTQ QYHLDDQKGK ELISGKFLEG 

       670 
DICIEGYGFQ VLELS 

« Hide

References

[1]"The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
J. Bacteriol. 193:5862-5863(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M1 EMBL CCC84767.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE577054 Genomic DNA. Translation: CCC84767.1.
RefSeqYP_005959474.1. NC_017542.1.

3D structure databases

ProteinModelPortalG0W116.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCC84767; CCC84767; PPM_1830.
GeneID12550533.
KEGGppo:PPM_1830.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK12308.

Enzyme and pathway databases

BioCycPPOL1052684:GLI7-1917-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0W116_PAEPO
AccessionPrimary (citable) accession number: G0W116
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 19, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)