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G0W116

- G0W116_PAEPO

UniProt

G0W116 - G0W116_PAEPO

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Protein

Beta-galactosidase

Gene

pbg

Organism
Paenibacillus polymyxa M1
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei111 – 1111SubstrateUniRule annotation
Metal bindingi115 – 1151ZincUniRule annotation
Active sitei150 – 1501Proton donorUniRule annotation
Metal bindingi155 – 1551ZincUniRule annotation
Metal bindingi157 – 1571ZincUniRule annotation
Metal bindingi160 – 1601ZincUniRule annotation
Active sitei307 – 3071NucleophileUniRule annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. galactose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Ligandi

Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciPPOL1052684:GLI7-1917-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
Short name:
Beta-galUniRule annotation
Gene namesi
Name:pbgImported
ORF Names:PPM_1830Imported
OrganismiPaenibacillus polymyxa M1Imported
Taxonomic identifieri1052684 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000001644: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliG0W116.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 42 family.UniRule annotation

Phylogenomic databases

KOiK12308.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProiIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFiPIRSF001084. B-galactosidase. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

G0W116-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MISSKLPKVF YGGDYNPEQW DEATHQEDLR MFRQAGIDIA TLNVFSWAKI
60 70 80 90 100
QSDEITYHFE WLDQLIDNLY ESDIFVCLAT STAAHPAWMA TRYPDILRVD
110 120 130 140 150
ADGRKRKFGG RHNSCPNSPT YRKYAEQMAD RLAERYKDHP AILVWHVSNE
160 170 180 190 200
YGGDCYCDNC AAAFRVWLKQ KYESLEELNR VWNTSFWGHT FYDWDEIVPP
210 220 230 240 250
NNLSEHWGEN HSTFQGISLD YARFNSDSML DCYLLEYNAI KKHIPDAVVT
260 270 280 290 300
TNLMGFFKQL DYFKWAKHMD IVSWDSYPGA NTPISYTAMA HDLMRGLKDG
310 320 330 340 350
QPFMLMEQTP SQQNWQAYNS LKRPGVMRLW SYQAVAHGAD TVMFFQLRRS
360 370 380 390 400
IGACEKFHGA VIEHAGHENT RVFREVAQLG NELGALGNTL LDATVHAKVA
410 420 430 440 450
ILFDWDNWWA LEKSSGPSVA LKYLDQVHKY YATLFRRNVQ VDLISVDTDF
460 470 480 490 500
QKYDLIIAPV LYMVKPSTAE KLEQFTERGG TFLTTFFSGI VNENDLVTTG
510 520 530 540 550
GYPGKLRNLL GIWVEEIDAL LPESHNRIIL KEKVGVLEGE YKCGLLCDLL
560 570 580 590 600
HSEGAEVLAE YGDDFYQGMP VLTRNRFGQG EAWYVATDPE EPFLDGLLGY
610 620 630 640 650
ICEQKGISSL LRAPAGIEAT MRSKDGKSYL FVLNHNAQTQ QYHLDDQKGK
660 670
ELISGKFLEG DICIEGYGFQ VLELS
Length:675
Mass (Da):77,203
Last modified:October 19, 2011 - v1
Checksum:i058EC47D600A3EBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE577054 Genomic DNA. Translation: CCC84767.1.
RefSeqiWP_013370620.1. NC_017542.1.
YP_005959474.1. NC_017542.1.

Genome annotation databases

EnsemblBacteriaiCCC84767; CCC84767; PPM_1830.
GeneIDi12550533.
KEGGippo:PPM_1830.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE577054 Genomic DNA. Translation: CCC84767.1 .
RefSeqi WP_013370620.1. NC_017542.1.
YP_005959474.1. NC_017542.1.

3D structure databases

ProteinModelPortali G0W116.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCC84767 ; CCC84767 ; PPM_1830 .
GeneIDi 12550533.
KEGGi ppo:PPM_1830.

Phylogenomic databases

KOi K12308.

Enzyme and pathway databases

BioCyci PPOL1052684:GLI7-1917-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProi IPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view ]
PIRSFi PIRSF001084. B-galactosidase. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
    Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
    J. Bacteriol. 193:5862-5863(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M1Imported.

Entry informationi

Entry nameiG0W116_PAEPO
AccessioniPrimary (citable) accession number: G0W116
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: November 26, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3