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G0VYX7 (G0VYX7_PAEPO) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CCC85674.1
Gene names
Name:ligB3 EMBL CCC85674.1
ORF Names:PPM_2737 EMBL CCC85674.1
OrganismPaenibacillus polymyxa M1 [Complete proteome] EMBL CCC85674.1
Taxonomic identifier1052684 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCC85674.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0VYX7 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 19C2E47CDA49C049

FASTA28632,464
        10         20         30         40         50         60 
MFISPMLLET AAAPFSDSRY IFEPKIDGHR LIYSQQNGIV RLFTRHNNDC TRQYPEIASV 

        70         80         90        100        110        120 
TFPHDIVLDG EIACVDPTTG VSDFESVMSR FQARKTDKIT KLVAELPATF VVFDVLSFKG 

       130        140        150        160        170        180 
EDLRSLPLME RKSILASLTL PSPSFGVVPY IEGAGEALFE QIEARGMEGL VAKRKDSMYI 

       190        200        210        220        230        240 
SRRSASWQKV INWSYADVYI TGYRKEEFGW LVSVPNERGN LRPAGIIEHG ASPMHKKAFY 

       250        260        270        280 
GVVAPLKTDE DREFVYVEPR IRARVKMRNW TKAGNLRIPV FTEFIV 

« Hide

References

[1]"The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
J. Bacteriol. 193:5862-5863(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M1 EMBL CCC85674.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE577054 Genomic DNA. Translation: CCC85674.1.
RefSeqYP_005960381.1. NC_017542.1.

3D structure databases

ProteinModelPortalG0VYX7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCC85674; CCC85674; PPM_2737.
GeneID12551452.
KEGGppo:PPM_2737.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPPOL1052684:GLI7-2830-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0VYX7_PAEPO
AccessionPrimary (citable) accession number: G0VYX7
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)