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G0VYX7

- G0VYX7_PAEPO

UniProt

G0VYX7 - G0VYX7_PAEPO

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligB3

Organism
Paenibacillus polymyxa M1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPPOL1052684:GLI7-2830-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligB3Imported
    ORF Names:PPM_2737Imported
    OrganismiPaenibacillus polymyxa M1Imported
    Taxonomic identifieri1052684 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000001644: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG0VYX7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0VYX7-1 [UniParc]FASTAAdd to Basket

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    MFISPMLLET AAAPFSDSRY IFEPKIDGHR LIYSQQNGIV RLFTRHNNDC    50
    TRQYPEIASV TFPHDIVLDG EIACVDPTTG VSDFESVMSR FQARKTDKIT 100
    KLVAELPATF VVFDVLSFKG EDLRSLPLME RKSILASLTL PSPSFGVVPY 150
    IEGAGEALFE QIEARGMEGL VAKRKDSMYI SRRSASWQKV INWSYADVYI 200
    TGYRKEEFGW LVSVPNERGN LRPAGIIEHG ASPMHKKAFY GVVAPLKTDE 250
    DREFVYVEPR IRARVKMRNW TKAGNLRIPV FTEFIV 286
    Length:286
    Mass (Da):32,464
    Last modified:October 19, 2011 - v1
    Checksum:i19C2E47CDA49C049
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577054 Genomic DNA. Translation: CCC85674.1.
    RefSeqiWP_014599900.1. NC_017542.1.
    YP_005960381.1. NC_017542.1.

    Genome annotation databases

    EnsemblBacteriaiCCC85674; CCC85674; PPM_2737.
    GeneIDi12551452.
    KEGGippo:PPM_2737.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577054 Genomic DNA. Translation: CCC85674.1 .
    RefSeqi WP_014599900.1. NC_017542.1.
    YP_005960381.1. NC_017542.1.

    3D structure databases

    ProteinModelPortali G0VYX7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCC85674 ; CCC85674 ; PPM_2737 .
    GeneIDi 12551452.
    KEGGi ppo:PPM_2737.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PPOL1052684:GLI7-2830-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
      Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
      J. Bacteriol. 193:5862-5863(2011)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M1Imported.

    Entry informationi

    Entry nameiG0VYX7_PAEPO
    AccessioniPrimary (citable) accession number: G0VYX7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3