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G0VYX7

- G0VYX7_PAEPO

UniProt

G0VYX7 - G0VYX7_PAEPO

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
ligB3, PPM_2737
Organism
Paenibacillus polymyxa M1
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPPOL1052684:GLI7-2830-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligB3Imported
ORF Names:PPM_2737Imported
OrganismiPaenibacillus polymyxa M1Imported
Taxonomic identifieri1052684 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000001644: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0VYX7.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0VYX7-1 [UniParc]FASTAAdd to Basket

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MFISPMLLET AAAPFSDSRY IFEPKIDGHR LIYSQQNGIV RLFTRHNNDC    50
TRQYPEIASV TFPHDIVLDG EIACVDPTTG VSDFESVMSR FQARKTDKIT 100
KLVAELPATF VVFDVLSFKG EDLRSLPLME RKSILASLTL PSPSFGVVPY 150
IEGAGEALFE QIEARGMEGL VAKRKDSMYI SRRSASWQKV INWSYADVYI 200
TGYRKEEFGW LVSVPNERGN LRPAGIIEHG ASPMHKKAFY GVVAPLKTDE 250
DREFVYVEPR IRARVKMRNW TKAGNLRIPV FTEFIV 286
Length:286
Mass (Da):32,464
Last modified:October 19, 2011 - v1
Checksum:i19C2E47CDA49C049
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE577054 Genomic DNA. Translation: CCC85674.1.
RefSeqiWP_014599900.1. NC_017542.1.
YP_005960381.1. NC_017542.1.

Genome annotation databases

EnsemblBacteriaiCCC85674; CCC85674; PPM_2737.
GeneIDi12551452.
KEGGippo:PPM_2737.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE577054 Genomic DNA. Translation: CCC85674.1 .
RefSeqi WP_014599900.1. NC_017542.1.
YP_005960381.1. NC_017542.1.

3D structure databases

ProteinModelPortali G0VYX7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCC85674 ; CCC85674 ; PPM_2737 .
GeneIDi 12551452.
KEGGi ppo:PPM_2737.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci PPOL1052684:GLI7-2830-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
    Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
    J. Bacteriol. 193:5862-5863(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M1Imported.

Entry informationi

Entry nameiG0VYX7_PAEPO
AccessioniPrimary (citable) accession number: G0VYX7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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