Skip Header

Contribute Send feedback
Read comments (?) or add your own

G0VWS0 (G0VWS0_PAEPO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP-Rule MF_00147
Short name=TIM HAMAP-Rule MF_00147
EC=5.3.1.1 HAMAP-Rule MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP-Rule MF_00147
Gene names
Name:tpi EMBL CCC83109.1
Synonyms:tpiA HAMAP-Rule MF_00147
ORF Names:PPM_0172 EMBL CCC83109.1
OrganismPaenibacillus polymyxa M1 EMBL CCC83109.1
Taxonomic identifier1052684 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site941Electrophile By similarity HAMAP-Rule MF_00147
Active site1661Proton acceptor By similarity HAMAP-Rule MF_00147
Binding site91Substrate By similarity HAMAP-Rule MF_00147
Binding site111Substrate By similarity HAMAP-Rule MF_00147

Sequences

Sequence LengthMass (Da)Tools
G0VWS0 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 867DE8C04F3BCCA5

FASTA25026,750
        10         20         30         40         50         60 
MRTPIIAGNW KMFKTVPEAK TFIEEIKGKA EVAGVESVIC APFTNLPALV EAVKGTSIKI 

        70         80         90        100        110        120 
GAQNLHFAED GAFTGEISGG MLKDLGVDYV VIGHSERREY FNETDETVNK KVHAAFRHGL 

       130        140        150        160        170        180 
TPIVCVGEKL EDREAGQTKE VVKVQTVAAF AGLAKDQAAQ VVVAYEPIWA IGTGKSSTSQ 

       190        200        210        220        230        240 
DANEVISYIR SLIKELYDEN TASAVRIQYG GSVKPENVTE YLGQSDIDGA LVGGASLQPA 

       250 
SYIALVEGAK

« Hide

References

[1]"The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides."
Niu B., Rueckert C., Blom J., Wang Q., Borriss R.
J. Bacteriol. 193:5862-5863(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M1 EMBL CCC83109.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		HE577054 Genomic DNA. Translation: CCC83109.1.
RefSeqYP_005957816.1. NC_017542.1.

3D structure databases

ProteinModelPortalG0VWS0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCC83109; CCC83109; PPM_0172.
GeneID12548806.
KEGGppo:PPM_0172.

Phylogenomic databases

KOK01803.

Enzyme and pathway databases

UniPathwayUPA00109; UER00189.
UPA00138.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_00147_B. TIM_B.
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
PANTHERPTHR21139. PTHR21139. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0VWS0_PAEPO
AccessionPrimary (citable) accession number: G0VWS0
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info