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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

MELS_0002

Organism
Megasphaera elsdenii DSM 20460
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
ORF Names:MELS_0002Imported
OrganismiMegasphaera elsdenii DSM 20460Imported
Taxonomic identifieri1064535 [NCBI]
Taxonomic lineageiBacteriaFirmicutesNegativicutesSelenomonadalesVeillonellaceaeMegasphaera
ProteomesiUP000010111 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0VQG9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK07250.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

G0VQG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKDELPKIV TQTVPGPKAA AVLARRRQAI PDAIGTIYPT VIKRGEGAMF
60 70 80 90 100
EDVDGNYFLD WVGGVGVLNI GYSQPEVVKA VQDQAGNYFH AMANIVTHEG
110 120 130 140 150
YVALAEKLNA IAPVKGDKKR SFFINSGAEA DENAVKVAKA YTKRPNIIVF
160 170 180 190 200
SGAFHGRTLM TMAMTAKKAY ARGMGPFPDG VYRAEFPYLY RKPAGLSDDE
210 220 230 240 250
ALEFYMDSLK EVFMYSSPAE YVAAIVVEPL QGEGGFIPAP IPWIKALRKV
260 270 280 290 300
CDDNGILLIA DEVQTGWCRT GRMLATKYWK EAGCPPDIIA TAKSIGGGVP
310 320 330 340 350
LGAVVAREEI MESVPAGVIG GTFGGNALAC ASALKVIEIM ERDHLADRAL
360 370 380 390 400
EIGKKVCARY EQWKQKYDVI GDYRGLGAML GLEFVHDKAG KEPYPELVTA
410 420 430 440 450
VIKEAAQHGL IMENCGIYDN VIRFLCPLVV TDAQLDAGLD ILEQAILTCT

K
Length:451
Mass (Da):48,934
Last modified:October 18, 2011 - v1
Checksum:i8DF718DBC0903393
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE576794 Genomic DNA. Translation: CCC72226.1.
RefSeqiWP_014014972.1. NC_015873.1.
YP_004765053.1. NC_015873.1.

Genome annotation databases

EnsemblBacteriaiCCC72226; CCC72226; MELS_0002.
KEGGimed:MELS_0002.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE576794 Genomic DNA. Translation: CCC72226.1.
RefSeqiWP_014014972.1. NC_015873.1.
YP_004765053.1. NC_015873.1.

3D structure databases

ProteinModelPortaliG0VQG9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCC72226; CCC72226; MELS_0002.
KEGGimed:MELS_0002.

Phylogenomic databases

KOiK07250.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome Sequence of the Ruminal Bacterium Megasphaera elsdenii."
    Marx H., Graf A.B., Tatto N., Thallinger G.G., Mattanovich D., Sauer M.
    J. Bacteriol. 193:5578-5579(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG0VQG9_MEGEL
AccessioniPrimary (citable) accession number: G0VQG9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 18, 2011
Last sequence update: October 18, 2011
Last modified: March 31, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.