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Protein
Submitted name:

Putative curved DNA-binding protein

Gene

CTHT_0023380

Organism
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotation

Keywords - Ligandi

DNA-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative curved DNA-binding proteinImported
Gene namesi
ORF Names:CTHT_0023380Imported
OrganismiChaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)Imported
Taxonomic identifieri759272 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesChaetomiaceaeChaetomium
ProteomesiUP000008066 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IPAX-ray2.30A/B/C/D1-415[»]
ProteinModelPortaliG0S4S7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OrthoDBiEOG7TQV9H.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.90.230.10. 2 hits.
InterProiIPR000994. Pept_M24_structural-domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00557. Peptidase_M24. 1 hit.
[Graphical view]
SUPFAMiSSF55920. SSF55920. 2 hits.

Sequencei

Sequence statusi: Complete.

G0S4S7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATEKKEADN VAISVDVLTK YKTAAQISEK VLAEVSKLCV PGAKIIDICE
60 70 80 90 100
QGDKLMEEEL SKVYRDKKTN KGFSHPTTVS PAAFITPYTP LRSDEKEAAT
110 120 130 140 150
EIQPGEPIKI QLGAQIDGYG TIVCDTIVAK NANDPDVIEG RQADLFLATY
160 170 180 190 200
YANEVLLRLM VPPGLLATGT DEEKAKAAAV KPPSQAKISS LLEKVAKAYD
210 220 230 240 250
CNIIESTTSW LFDKNEIEGK KKIILSPGEN IKGEGVPEVG DVWGVEVGCS
260 270 280 290 300
LGSGKVKQFE QRATLHRRTN NTYALKRPTS RKIYSEVQKK FGTFPFSLRQ
310 320 330 340 350
LEDERDAKSG VIECVRGGVF RQYEVTGDKD NAPVCRLLTT IAITKNGITR
360 370 380 390 400
IGGPPAWDLS KFKTDKKIED EEILKILEQP LSKNAGKNKN KKKKKKAKKA
410
AAKPDEGEEE SSDEE
Length:415
Mass (Da):45,607
Last modified:October 19, 2011 - v1
Checksum:i420B6C868999730F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL988041 Genomic DNA. Translation: EGS20506.1.
RefSeqiXP_006692802.1. XM_006692739.1.

Genome annotation databases

GeneIDi18256376.
KEGGicthr:CTHT_0023380.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL988041 Genomic DNA. Translation: EGS20506.1.
RefSeqiXP_006692802.1. XM_006692739.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IPAX-ray2.30A/B/C/D1-415[»]
ProteinModelPortaliG0S4S7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18256376.
KEGGicthr:CTHT_0023380.

Phylogenomic databases

OrthoDBiEOG7TQV9H.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.90.230.10. 2 hits.
InterProiIPR000994. Pept_M24_structural-domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00557. Peptidase_M24. 1 hit.
[Graphical view]
SUPFAMiSSF55920. SSF55920. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile."
    Amlacher S., Sarges P., Flemming D., van Noort V., Kunze R., Devos D.P., Arumugam M., Bork P., Hurt E.
    Cell 146:277-289(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 1495 / CBS 144.50 / IMI 039719Imported.
  2. Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).

Entry informationi

Entry nameiG0S4S7_CHATD
AccessioniPrimary (citable) accession number: G0S4S7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.