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Protein
Submitted name:

Putative ribosome associated protein

Gene

CTHT_0006310

Organism
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribosome associated proteinImported
Gene namesi
ORF Names:CTHT_0006310Imported
OrganismiChaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)Imported
Taxonomic identifieri759272 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesChaetomiaceaeChaetomium
ProteomesiUP000008066: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

DIPiDIP-60110N.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GMQX-ray1.30A352-446[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK09522.
OrthoDBiEOG7K3TX9.

Family and domain databases

Gene3Di1.10.287.110. 1 hit.
InterProiIPR001623. DnaJ_domain.
[Graphical view]
PfamiPF00226. DnaJ. 1 hit.
[Graphical view]
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
PROSITEiPS50076. DNAJ_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0RYD6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNATVVSLPL PTLPEGWAAE KDFKAIGKLT QEGSSMRTLE PVGPHFLAHA
60 70 80 90 100
RRVRHKRTFS EDDRIQAQAK AKKIEQDSDS DISEEEDPML LARDAKDWKT
110 120 130 140 150
QDHYKVLGLS KYRWRATEDQ IKRAHRKKVL KHHPDKKAAA GRADDDNFFK
160 170 180 190 200
CIQKAAEILL DPVKRRQFDS VDEEADIPPP TKKQLAKGNY YELWGKVFEN
210 220 230 240 250
EARFSKIQPV PGFGNENSTR EEVEAFYNFW YNFDSWRSFE YLDEDVPDDN
260 270 280 290 300
ENRDQKRHME RKNANARKKK KAEDNARLRK LVEEAQAGDE RIKRFRQEAN
310 320 330 340 350
AAKNKKRLER EAAERKAAEE ARLKKEAEER ARKEAEEKAK AEREAAKKAK
360 370 380 390 400
EAAKNAVKKN KRVLRGSVKE ANYFVEGEAS AATIDAVLND VDLVITKIDA
410 420 430 440
DEIAALAGKL NGLTVADEIK NVWKEEVSRL VGAGKLKEGD IKALVA
Length:446
Mass (Da):50,947
Last modified:October 19, 2011 - v1
Checksum:i414B4299FFC88EC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL988032 Genomic DNA. Translation: EGS23922.1.
RefSeqiXP_006691164.1. XM_006691101.1.

Genome annotation databases

GeneIDi18254669.
KEGGicthr:CTHT_0006310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL988032 Genomic DNA. Translation: EGS23922.1.
RefSeqiXP_006691164.1. XM_006691101.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4GMQX-ray1.30A352-446[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60110N.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18254669.
KEGGicthr:CTHT_0006310.

Phylogenomic databases

KOiK09522.
OrthoDBiEOG7K3TX9.

Family and domain databases

Gene3Di1.10.287.110. 1 hit.
InterProiIPR001623. DnaJ_domain.
[Graphical view]
PfamiPF00226. DnaJ. 1 hit.
[Graphical view]
SMARTiSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMiSSF46565. SSF46565. 1 hit.
PROSITEiPS50076. DNAJ_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile."
    Amlacher S., Sarges P., Flemming D., van Noort V., Kunze R., Devos D.P., Arumugam M., Bork P., Hurt E.
    Cell 146:277-289(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 1495 / CBS 144.50 / IMI 039719Imported.
  2. "Structural characterization of a eukaryotic chaperone--the ribosome-associated complex."
    Leidig C., Bange G., Kopp J., Amlacher S., Aravind A., Wickles S., Witte G., Hurt E., Beckmann R., Sinning I.
    Nat. Struct. Mol. Biol. 20:23-28(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS) OF 352-446.

Entry informationi

Entry nameiG0RYD6_CHATD
AccessioniPrimary (citable) accession number: G0RYD6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.