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G0RYD6

- G0RYD6_CHATD

UniProt

G0RYD6 - G0RYD6_CHATD

Protein
Submitted name:

Putative ribosome associated protein

Gene

CTHT_0006310

Organism
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ribosome associated proteinImported
    Gene namesi
    ORF Names:CTHT_0006310Imported
    OrganismiChaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)Imported
    Taxonomic identifieri759272 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesChaetomiaceaeChaetomium
    ProteomesiUP000008066: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-60110N.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4GMQX-ray1.30A352-446[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OrthoDBiEOG7K3TX9.

    Family and domain databases

    Gene3Di1.10.287.110. 1 hit.
    InterProiIPR001623. DnaJ_domain.
    [Graphical view]
    PfamiPF00226. DnaJ. 1 hit.
    [Graphical view]
    SMARTiSM00271. DnaJ. 1 hit.
    [Graphical view]
    SUPFAMiSSF46565. SSF46565. 1 hit.
    PROSITEiPS50076. DNAJ_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0RYD6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNATVVSLPL PTLPEGWAAE KDFKAIGKLT QEGSSMRTLE PVGPHFLAHA    50
    RRVRHKRTFS EDDRIQAQAK AKKIEQDSDS DISEEEDPML LARDAKDWKT 100
    QDHYKVLGLS KYRWRATEDQ IKRAHRKKVL KHHPDKKAAA GRADDDNFFK 150
    CIQKAAEILL DPVKRRQFDS VDEEADIPPP TKKQLAKGNY YELWGKVFEN 200
    EARFSKIQPV PGFGNENSTR EEVEAFYNFW YNFDSWRSFE YLDEDVPDDN 250
    ENRDQKRHME RKNANARKKK KAEDNARLRK LVEEAQAGDE RIKRFRQEAN 300
    AAKNKKRLER EAAERKAAEE ARLKKEAEER ARKEAEEKAK AEREAAKKAK 350
    EAAKNAVKKN KRVLRGSVKE ANYFVEGEAS AATIDAVLND VDLVITKIDA 400
    DEIAALAGKL NGLTVADEIK NVWKEEVSRL VGAGKLKEGD IKALVA 446
    Length:446
    Mass (Da):50,947
    Last modified:October 19, 2011 - v1
    Checksum:i414B4299FFC88EC0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL988032 Genomic DNA. Translation: EGS23922.1.
    RefSeqiXP_006691164.1. XM_006691101.1.

    Genome annotation databases

    GeneIDi18254669.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL988032 Genomic DNA. Translation: EGS23922.1 .
    RefSeqi XP_006691164.1. XM_006691101.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4GMQ X-ray 1.30 A 352-446 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-60110N.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 18254669.

    Phylogenomic databases

    OrthoDBi EOG7K3TX9.

    Family and domain databases

    Gene3Di 1.10.287.110. 1 hit.
    InterProi IPR001623. DnaJ_domain.
    [Graphical view ]
    Pfami PF00226. DnaJ. 1 hit.
    [Graphical view ]
    SMARTi SM00271. DnaJ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46565. SSF46565. 1 hit.
    PROSITEi PS50076. DNAJ_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile."
      Amlacher S., Sarges P., Flemming D., van Noort V., Kunze R., Devos D.P., Arumugam M., Bork P., Hurt E.
      Cell 146:277-289(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 1495 / CBS 144.50 / IMI 039719Imported.
    2. "Structural characterization of a eukaryotic chaperone--the ribosome-associated complex."
      Leidig C., Bange G., Kopp J., Amlacher S., Aravind A., Wickles S., Witte G., Hurt E., Beckmann R., Sinning I.
      Nat. Struct. Mol. Biol. 20:23-28(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS) OF 352-446.

    Entry informationi

    Entry nameiG0RYD6_CHATD
    AccessioniPrimary (citable) accession number: G0RYD6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3