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Protein
Submitted name:

Alpha-amylase, family GH13

Gene

susA

Organism
Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciZGAL63186:GJN9-370-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, family GH13Imported (EC:3.2.1.1Imported)
Gene namesi
Name:susAImported
Ordered Locus Names:zobellia_369Imported
OrganismiZobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)Imported
Taxonomic identifieri63186 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeZobellia
ProteomesiUP000008898 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiTWITNEL.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

G0L998-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKIYRFFCF GLAIMASCSS DDDQSVVADT NDNTQKEIIS PIELSDYDNG
60 70 80 90 100
SGVMMQTFYW DVEPRGEWWT NLSGKIDDWA ESGVDRLWLP VATKGASGGY
110 120 130 140 150
SMGYDPSDYF DFGEFDQHGT VETRFGSRQE LETLIEKAHG KGLEVIADIV
160 170 180 190 200
INHNSGGGEE YNPYRDKNTY TLFDELHGNA SGMFNRNFEN FYPNSTSNYD
210 220 230 240 250
DGSLFYAEQN LDHNQEYVQN WLWKSENSVA KYYKNVMGFD GWRFDYVLGY
260 270 280 290 300
EPWVVKAWLD EVGGFSVSEL WDGNADVLSQ YVDQTGSGVF DFATFYKLEE
310 320 330 340 350
AMDRFDDLTV LEGKMLWKTH PDKSVTFAAN HDTEKDENED NRIADENKLK
360 370 380 390 400
AYAYILTHPG YPTIFYSDYE NEAFKEPLKQ LVQIHNSLAI GDAEVLYVDN
410 420 430 440 450
DEYIMKRAGT DDNPGLILYI NTSGNTKKRT IKSAWNNSYL MDYTKNVHGS
460 470
ITSDENGEAL IEAPANGYSI WSIAKVN
Length:477
Mass (Da):54,386
Last modified:October 19, 2011 - v1
Checksum:i28D24825DBF25B42
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP476056 Genomic DNA. Translation: CAZ94442.1.
RefSeqiWP_013991755.1. NC_015844.1.
YP_004734834.1. NC_015844.1.

Genome annotation databases

GeneIDi10978630.
KEGGizga:zobellia_369.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP476056 Genomic DNA. Translation: CAZ94442.1.
RefSeqiWP_013991755.1. NC_015844.1.
YP_004734834.1. NC_015844.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10978630.
KEGGizga:zobellia_369.

Phylogenomic databases

KOiK01176.
OMAiTWITNEL.

Enzyme and pathway databases

BioCyciZGAL63186:GJN9-370-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Zobellia galactanivorans Dsij."
    Genoscope - CEA
    Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / DsijImported.

Entry informationi

Entry nameiG0L998_ZOBGA
AccessioniPrimary (citable) accession number: G0L998
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 7, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.