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G0L5G7

- G0L5G7_ZOBGA

UniProt

G0L5G7 - G0L5G7_ZOBGA

Protein
Submitted name:

DNA ligase

Gene

ligC

Organism
Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciZGAL63186:GJN9-2114-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligCImported
    Ordered Locus Names:zobellia_2113Imported
    OrganismiZobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)Imported
    Taxonomic identifieri63186 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeZobellia
    ProteomesiUP000008898: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG0L5G7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0L5G7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKPQTISEMD VPTSIASNEL GMRGFAALIK TLDSTNKTNI KVQALADYFR    50
    VANDTDKVWT IAILSHRRPP RPVNTTLLRE WASELANIPL WLFEESYHIV 100
    GDLAETIALI VPSSKTSTEK TLTQFLEEMI ALKKKSDVDK KTYLFENWKV 150
    LDYYERFVFT KLITGGFRIG VSQKLMTRAL AKATEIDEDI LAYKLMGNWD 200
    PNKITFQELI LEENESDYLS KPYPFYLAYA IENEPEDLGD VTHWSAEHKW 250
    DGIRSQVILR NDELFVWSRG EELVTDKYPE FNLFIQKIPN GTVIDGEILP 300
    YIDGQIGTFN DLQTRIGRKM ISKALLKKVP VILKAYDILE WKGKDIRNQP 350
    FTERRAILEK LFKEVNHTDL PFHLSETMHF NSWEEAAIER ERSREMFSEG 400
    LMLKHKDSPY LVGRKKGDWW KWKVDPLTID AVLTYAMRGH GRRSNLFTDY 450
    TFALWNTNDE GEKELVTFAK AYSGLTDAEF RKVDAWIKKN TLERFGPVRS 500
    VTPHHVFEIA FEGIALSKRH KSGVATRFPR ILRWRKDKTI HEANSLGDLK 550
    LMIP 554
    Length:554
    Mass (Da):64,252
    Last modified:October 19, 2011 - v1
    Checksum:i6368EA0A4FEF67B9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP476056 Genomic DNA. Translation: CAZ96271.1.
    RefSeqiWP_013993471.1. NC_015844.1.
    YP_004736552.1. NC_015844.1.

    Genome annotation databases

    GeneIDi10974935.
    KEGGizga:zobellia_2113.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP476056 Genomic DNA. Translation: CAZ96271.1 .
    RefSeqi WP_013993471.1. NC_015844.1.
    YP_004736552.1. NC_015844.1.

    3D structure databases

    ProteinModelPortali G0L5G7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 10974935.
    KEGGi zga:zobellia_2113.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci ZGAL63186:GJN9-2114-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Zobellia galactanivorans Dsij."
      Genoscope - CEA
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / DsijImported.

    Entry informationi

    Entry nameiG0L5G7_ZOBGA
    AccessioniPrimary (citable) accession number: G0L5G7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3