G0L5G7 (G0L5G7_ZOBGA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase EMBL CAZ96271.1
EC=6.5.1.1 EMBL CAZ96271.1

Gene names

Name:	ligC EMBL CAZ96271.1
Ordered Locus Names:	zobellia_2113 EMBL CAZ96271.1

Organism

Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) [Complete proteome] [HAMAP] EMBL CAZ96271.1

Taxonomic identifier

63186 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Zobellia

Protein attributes

Sequence length	554 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CAZ96271.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G0L5G7 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: 6368EA0A4FEF67B9	FASTA	554	64,252
	10 20 30 40 50 60 MKPQTISEMD VPTSIASNEL GMRGFAALIK TLDSTNKTNI KVQALADYFR VANDTDKVWT 70 80 90 100 110 120 IAILSHRRPP RPVNTTLLRE WASELANIPL WLFEESYHIV GDLAETIALI VPSSKTSTEK 130 140 150 160 170 180 TLTQFLEEMI ALKKKSDVDK KTYLFENWKV LDYYERFVFT KLITGGFRIG VSQKLMTRAL 190 200 210 220 230 240 AKATEIDEDI LAYKLMGNWD PNKITFQELI LEENESDYLS KPYPFYLAYA IENEPEDLGD 250 260 270 280 290 300 VTHWSAEHKW DGIRSQVILR NDELFVWSRG EELVTDKYPE FNLFIQKIPN GTVIDGEILP 310 320 330 340 350 360 YIDGQIGTFN DLQTRIGRKM ISKALLKKVP VILKAYDILE WKGKDIRNQP FTERRAILEK 370 380 390 400 410 420 LFKEVNHTDL PFHLSETMHF NSWEEAAIER ERSREMFSEG LMLKHKDSPY LVGRKKGDWW 430 440 450 460 470 480 KWKVDPLTID AVLTYAMRGH GRRSNLFTDY TFALWNTNDE GEKELVTFAK AYSGLTDAEF 490 500 510 520 530 540 RKVDAWIKKN TLERFGPVRS VTPHHVFEIA FEGIALSKRH KSGVATRFPR ILRWRKDKTI 550 HEANSLGDLK LMIP

References

[1]	"Complete genome sequence of Zobellia galactanivorans Dsij." Genoscope - CEA Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP476056 Genomic DNA. Translation: CAZ96271.1.
RefSeq	YP_004736552.1. NC_015844.1.
3D structure databases
ProteinModelPortal	G0L5G7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10974935.
KEGG	zga:zobellia_2113.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF117018. SSF117018. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G0L5G7_ZOBGA

Accession

Primary (citable) accession number: G0L5G7

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	March 6, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)