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G0L5G7

- G0L5G7_ZOBGA

UniProt

G0L5G7 - G0L5G7_ZOBGA

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Protein
Submitted name: DNA ligase
Gene
ligC, zobellia_2113
Organism
Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciZGAL63186:GJN9-2114-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligCImported
Ordered Locus Names:zobellia_2113Imported
OrganismiZobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)Imported
Taxonomic identifieri63186 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeZobellia
ProteomesiUP000008898: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0L5G7.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0L5G7-1 [UniParc]FASTAAdd to Basket

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MKPQTISEMD VPTSIASNEL GMRGFAALIK TLDSTNKTNI KVQALADYFR    50
VANDTDKVWT IAILSHRRPP RPVNTTLLRE WASELANIPL WLFEESYHIV 100
GDLAETIALI VPSSKTSTEK TLTQFLEEMI ALKKKSDVDK KTYLFENWKV 150
LDYYERFVFT KLITGGFRIG VSQKLMTRAL AKATEIDEDI LAYKLMGNWD 200
PNKITFQELI LEENESDYLS KPYPFYLAYA IENEPEDLGD VTHWSAEHKW 250
DGIRSQVILR NDELFVWSRG EELVTDKYPE FNLFIQKIPN GTVIDGEILP 300
YIDGQIGTFN DLQTRIGRKM ISKALLKKVP VILKAYDILE WKGKDIRNQP 350
FTERRAILEK LFKEVNHTDL PFHLSETMHF NSWEEAAIER ERSREMFSEG 400
LMLKHKDSPY LVGRKKGDWW KWKVDPLTID AVLTYAMRGH GRRSNLFTDY 450
TFALWNTNDE GEKELVTFAK AYSGLTDAEF RKVDAWIKKN TLERFGPVRS 500
VTPHHVFEIA FEGIALSKRH KSGVATRFPR ILRWRKDKTI HEANSLGDLK 550
LMIP 554
Length:554
Mass (Da):64,252
Last modified:October 19, 2011 - v1
Checksum:i6368EA0A4FEF67B9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP476056 Genomic DNA. Translation: CAZ96271.1.
RefSeqiWP_013993471.1. NC_015844.1.
YP_004736552.1. NC_015844.1.

Genome annotation databases

GeneIDi10974935.
KEGGizga:zobellia_2113.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP476056 Genomic DNA. Translation: CAZ96271.1 .
RefSeqi WP_013993471.1. NC_015844.1.
YP_004736552.1. NC_015844.1.

3D structure databases

ProteinModelPortali G0L5G7.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 10974935.
KEGGi zga:zobellia_2113.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci ZGAL63186:GJN9-2114-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Zobellia galactanivorans Dsij."
    Genoscope - CEA
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij.

Entry informationi

Entry nameiG0L5G7_ZOBGA
AccessioniPrimary (citable) accession number: G0L5G7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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