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G0L5G7 (G0L5G7_ZOBGA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAZ96271.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G0L5G7 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 6368EA0A4FEF67B9

FASTA55464,252
        10         20         30         40         50         60 
MKPQTISEMD VPTSIASNEL GMRGFAALIK TLDSTNKTNI KVQALADYFR VANDTDKVWT 

        70         80         90        100        110        120 
IAILSHRRPP RPVNTTLLRE WASELANIPL WLFEESYHIV GDLAETIALI VPSSKTSTEK 

       130        140        150        160        170        180 
TLTQFLEEMI ALKKKSDVDK KTYLFENWKV LDYYERFVFT KLITGGFRIG VSQKLMTRAL 

       190        200        210        220        230        240 
AKATEIDEDI LAYKLMGNWD PNKITFQELI LEENESDYLS KPYPFYLAYA IENEPEDLGD 

       250        260        270        280        290        300 
VTHWSAEHKW DGIRSQVILR NDELFVWSRG EELVTDKYPE FNLFIQKIPN GTVIDGEILP 

       310        320        330        340        350        360 
YIDGQIGTFN DLQTRIGRKM ISKALLKKVP VILKAYDILE WKGKDIRNQP FTERRAILEK 

       370        380        390        400        410        420 
LFKEVNHTDL PFHLSETMHF NSWEEAAIER ERSREMFSEG LMLKHKDSPY LVGRKKGDWW 

       430        440        450        460        470        480 
KWKVDPLTID AVLTYAMRGH GRRSNLFTDY TFALWNTNDE GEKELVTFAK AYSGLTDAEF 

       490        500        510        520        530        540 
RKVDAWIKKN TLERFGPVRS VTPHHVFEIA FEGIALSKRH KSGVATRFPR ILRWRKDKTI 

       550 
HEANSLGDLK LMIP 

« Hide

References

[1]"Complete genome sequence of Zobellia galactanivorans Dsij."
Genoscope - CEA
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP476056 Genomic DNA. Translation: CAZ96271.1.
RefSeqYP_004736552.1. NC_015844.1.

3D structure databases

ProteinModelPortalG0L5G7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10974935.
KEGGzga:zobellia_2113.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycZGAL63186:GJN9-2114-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0L5G7_ZOBGA
AccessionPrimary (citable) accession number: G0L5G7
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)