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G0K4I3 (G0K4I3_STEMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonucleoside-diphosphate reductase RuleBase RU003410
EC=1.17.4.1 RuleBase RU003410
Gene names
ORF Names:BurJV3_0201 EMBL AEM49537.1
OrganismStenotrophomonas maltophilia JV3 EMBL AEM49537.1
Taxonomic identifier868597 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group ›

Protein attributes

Sequence length800 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides By similarity. RuleBase RU003410

Catalytic activity

2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. RuleBase RU003410

Pathway

Genetic information processing; DNA replication. RuleBase RU003410

Sequence similarities

Belongs to the ribonucleoside diphosphate reductase large chain family. RuleBase RU003410

Sequences

Sequence LengthMass (Da)Tools
G0K4I3 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 5BE9023C469C62EB

FASTA80089,339
        10         20         30         40         50         60 
MSTESSATIE KESEFLLTSP PTANAMSVTK RNGTTELVDL NKIVRAVQRS SEGLHAVDPM 

        70         80         90        100        110        120 
RVATRTISGL YNGATTRELD ELSIRTAALL IGEEPEYGRL AARLLANYIA KEVSGQEIYA 

       130        140        150        160        170        180 
FSQSVSRGHE VGLINDRLLN FVQTNARKLN DAIDGALDLN FDYFGLRTLY DRYLLRHPHT 

       190        200        210        220        230        240 
RKVIETPQQF FLRIASALSE DVSETLALYK RMGNLDYLPS SPTLFNSGTT HEQLSSCFLL 

       250        260        270        280        290        300 
DSPQDSLESI YSKYGDIAQL SKFSGGIGVS YTRVRSRGSL IKSTNGHSNG IVPWLKTMDS 

       310        320        330        340        350        360 
SVAAVNQGGK RKGAACVYLE TWHADIEDFL ELRDNTGDEA RRAHNLNLAN WVPDLFMKRV 

       370        380        390        400        410        420 
EADQEWSLFD PRVVPEFTDL FGEAFEQAYL QAEAQGKANR TISARKLYAR MMRTLAETGN 

       430        440        450        460        470        480 
GWMTFKDKCN RASNQTLRAG NVIHLSNLCT EILEVTSNDE TAVCNLGSIN LGNHFDEHNE 

       490        500        510        520        530        540 
FDFEKLAETV RLAVRQLDRV IDLNFYPIET ARRANLRWRP VGLGCMGLQD VFFRKRLPFD 

       550        560        570        580        590        600 
SAEARALSKK IAEAIYFHAL ETSCELAQER GKHPSFNDTR AAGGELQFDA WNVVPEDTAR 

       610        620        630        640        650        660 
WDALRARIKE HGLRNSLMIA IAPTATIASI AGCYECVEPQ VSNLFKRETL SGDFLQVNRY 

       670        680        690        700        710        720 
LVNELKKLGL WTPEMRDAIK LAEGSIAGVA QIPETLREVY RTAWELPMRS LIDMAAERGA 

       730        740        750        760        770        780 
FIDQSASLNL FMESPNIGAM SSMYMYAWKQ GIKTTYYLRS RPATKIAKTT VSAAAPAKVF 

       790        800 
SPDEAIACSL ENPEACEACQ

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References

[1]"Complete sequence of Stenotrophomonas maltophilia JV3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Medau R. expand/collapse author list , Furlan B., Mui Tsai S., Rodriques J., Tiedje J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JV3 EMBL AEM49537.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002986 Genomic DNA. Translation: AEM49537.1.
RefSeqYP_004790763.1. NC_015947.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM49537; AEM49537; BurJV3_0201.
GeneID11044903.
KEGGbuj:BurJV3_0201.

Phylogenomic databases

KOK00525.

Enzyme and pathway databases

BioCycSMAL868597:GHCG-201-MONOMER.
UniPathwayUPA00326.

Family and domain databases

InterProIPR005144. ATP-cone.
IPR013346. NrdE_NrdA.
IPR000788. RNR_lg_C.
IPR013509. RNR_lsu_N.
IPR008926. RNR_R1-su_N.
[Graphical view]
PfamPF03477. ATP-cone. 1 hit.
PF02867. Ribonuc_red_lgC. 1 hit.
PF00317. Ribonuc_red_lgN. 1 hit.
[Graphical view]
PRINTSPR01183. RIBORDTASEM1.
SUPFAMSSF48168. Ribonucleo_red_N. 1 hit.
TIGRFAMsTIGR02506. NrdE_NrdA. 1 hit.
PROSITEPS51161. ATP_CONE. 1 hit.
PS00089. RIBORED_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0K4I3_STEMA
AccessionPrimary (citable) accession number: G0K4I3
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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