Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G0K2F2 (G0K2F2_STEMA) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:BurJV3_2260 EMBL AEM51582.1
OrganismStenotrophomonas maltophilia JV3 [Complete proteome] EMBL AEM51582.1
Taxonomic identifier868597 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group

Protein attributes

Sequence length793 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell outer membrane By similarity.

Sequence similarities

Belongs to the GSP D family. RuleBase RU004003

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL AEM51582.1
Chain30 – 793764 Potential EMBL AEM51582.1
PRO_5000781268

Sequences

Sequence LengthMass (Da)Tools
G0K2F2 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: C28657A33A984ED8

FASTA79383,303
        10         20         30         40         50         60 
MRAMRSLACS TALALVVGMA HVPAPVAAQD ARDEPVQLNL VDTDIGGVLR MAARFTGRQF 

        70         80         90        100        110        120 
LVDPRVTGKM TVVSDGPVSR TQAYQLLLGA LRMRGFAVVE NGGVSRVVPQ ADAKLLGGRV 

       130        140        150        160        170        180 
GSGGAGGEIA TRTFALRYEN AAALVAVLRP MISPDNPITA NPGNNTLVIT DYADNLERIA 

       190        200        210        220        230        240 
RVIASVDTPA GMDTDVVKLQ QGIAVDVAAM VAPLLDAQGA EPSQRVVVMA DPRSNSVLLR 

       250        260        270        280        290        300 
SSSPGRTRLA RQLVEKLDRA QDESGNLHVV YLRNAQANQL AGVLRGVVAG QSDAPAMGSN 

       310        320        330        340        350        360 
EGITPLPGDA NRSTPAQPSQ PQQAKTGGNA LESQRLDPNR RDPIDAGSTG FSQNGISVQA 

       370        380        390        400        410        420 
DVATNTLLIS APEPVYRNLR RVIDQLDQRR AQVLVESLIV EVNQTDAAEL GVQWMLGNGR 

       430        440        450        460        470        480 
TFGGTHFGGT TGGSGLNTTA RTTLDVLPKD GLKIGVIDGT INLPGVGQIL NMKALANALQ 

       490        500        510        520        530        540 
SKGGANILST PNLMTLDNEA ASIMVGQTVP FVSGRYVTDG GGGSNNPFQT IVREDVGLKL 

       550        560        570        580        590        600 
RVRPQISEGG TVKLDIYQEV SSIDAQGANS TAGIITNKRA LDTSVLLDDG QIMVLGGLLE 

       610        620        630        640        650        660 
DSVSHGRDAV PGLGKLPVLG ALFRSDTRKR AKTNLMVFLR PHVVRDPAAG QRLTRDRYDY 

       670        680        690        700        710        720 
MRNAQAGAQP VQSWALPALS APQLPPQDLS VLGQGNARDG LGQPLQNTSL AALYPAGDGD 

       730        740        750        760        770        780 
AQLVQFAQGL DPARASQGVA QVRALGLQAY AEATPGESGQ RLRVRLPRDP AKLDPALQQL 

       790 
RGLGYTPELV IGP 

« Hide

References

[1]"Complete sequence of Stenotrophomonas maltophilia JV3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Medau R. expand/collapse author list , Furlan B., Mui Tsai S., Rodriques J., Tiedje J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JV3 EMBL AEM51582.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002986 Genomic DNA. Translation: AEM51582.1.
RefSeqYP_004792808.1. NC_015947.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM51582; AEM51582; BurJV3_2260.
GeneID11047016.
KEGGbuj:BurJV3_2260.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02453.

Enzyme and pathway databases

BioCycSMAL868597:GHCG-2314-MONOMER.

Family and domain databases

InterProIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR013356. T2SS_GspD.
[Graphical view]
PfamPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 3 hits.
[Graphical view]
PRINTSPR00811. BCTERIALGSPD.
TIGRFAMsTIGR02517. type_II_gspD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0K2F2_STEMA
AccessionPrimary (citable) accession number: G0K2F2
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 22, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)