G0K2F2 (G0K2F2_STEMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
General secretion pathway protein D EMBL AEM51582.1

Gene names

ORF Names:

BurJV3_2260 EMBL AEM51582.1

Organism

Stenotrophomonas maltophilia JV3 EMBL AEM51582.1

Taxonomic identifier

868597 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Stenotrophomonas › Stenotrophomonas maltophilia group › Stenotrophomonas maltophilia

Protein attributes

Sequence length	793 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell outer membrane By similarity RuleBase RU004004.
Sequence similarities	Belongs to the GSP D family. RuleBase RU004003

Ontologies

Keywords
Biological process	Transport RuleBase RU004004
Domain	Signal EMBL AEM51582.1
Gene Ontology (GO)
Biological_process	protein secretion by the type II secretion system Inferred from electronic annotation. Source: InterPro
Cellular_component	cell outer membrane Inferred from electronic annotation. Source: UniProtKB-SubCell type II protein secretion system complex Inferred from electronic annotation. Source: InterPro
Molecular_function	protein transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL AEM51582.1
	Chain	30 – 793	764	Potential EMBL AEM51582.1		PRO_5000781268

Sequences

	Sequence		Length	Mass (Da)
	G0K2F2 [UniParc]. Last modified October 19, 2011. Version 1. Checksum: C28657A33A984ED8	FASTA	793	83,303
	10 20 30 40 50 60 MRAMRSLACS TALALVVGMA HVPAPVAAQD ARDEPVQLNL VDTDIGGVLR MAARFTGRQF 70 80 90 100 110 120 LVDPRVTGKM TVVSDGPVSR TQAYQLLLGA LRMRGFAVVE NGGVSRVVPQ ADAKLLGGRV 130 140 150 160 170 180 GSGGAGGEIA TRTFALRYEN AAALVAVLRP MISPDNPITA NPGNNTLVIT DYADNLERIA 190 200 210 220 230 240 RVIASVDTPA GMDTDVVKLQ QGIAVDVAAM VAPLLDAQGA EPSQRVVVMA DPRSNSVLLR 250 260 270 280 290 300 SSSPGRTRLA RQLVEKLDRA QDESGNLHVV YLRNAQANQL AGVLRGVVAG QSDAPAMGSN 310 320 330 340 350 360 EGITPLPGDA NRSTPAQPSQ PQQAKTGGNA LESQRLDPNR RDPIDAGSTG FSQNGISVQA 370 380 390 400 410 420 DVATNTLLIS APEPVYRNLR RVIDQLDQRR AQVLVESLIV EVNQTDAAEL GVQWMLGNGR 430 440 450 460 470 480 TFGGTHFGGT TGGSGLNTTA RTTLDVLPKD GLKIGVIDGT INLPGVGQIL NMKALANALQ 490 500 510 520 530 540 SKGGANILST PNLMTLDNEA ASIMVGQTVP FVSGRYVTDG GGGSNNPFQT IVREDVGLKL 550 560 570 580 590 600 RVRPQISEGG TVKLDIYQEV SSIDAQGANS TAGIITNKRA LDTSVLLDDG QIMVLGGLLE 610 620 630 640 650 660 DSVSHGRDAV PGLGKLPVLG ALFRSDTRKR AKTNLMVFLR PHVVRDPAAG QRLTRDRYDY 670 680 690 700 710 720 MRNAQAGAQP VQSWALPALS APQLPPQDLS VLGQGNARDG LGQPLQNTSL AALYPAGDGD 730 740 750 760 770 780 AQLVQFAQGL DPARASQGVA QVRALGLQAY AEATPGESGQ RLRVRLPRDP AKLDPALQQL 790 RGLGYTPELV IGP

References

[1]

"Complete sequence of Stenotrophomonas maltophilia JV3." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Medau R. , Furlan B., Mui Tsai S., Rodriques J., Tiedje J., Woyke T. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: JV3 EMBL AEM51582.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002986 Genomic DNA. Translation: AEM51582.1.
RefSeq	YP_004792808.1. NC_015947.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEM51582; AEM51582; BurJV3_2260.
GeneID	11047016.
KEGG	buj:BurJV3_2260.
Phylogenomic databases
KO	K02453.
Enzyme and pathway databases
BioCyc	SMAL868597:GHCG-2314-MONOMER.
Family and domain databases
InterPro	IPR001775. GspD/PilQ. IPR005644. NolW-like. IPR004846. T2SS/T3SS. IPR013356. T2SS_GspD. [Graphical view]
Pfam	PF00263. Secretin. 1 hit. PF03958. Secretin_N. 3 hits. [Graphical view]
PRINTS	PR00811. BCTERIALGSPD.
TIGRFAMs	TIGR02517. type_II_gspD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G0K2F2_STEMA

Accession

Primary (citable) accession number: G0K2F2

Entry history

Integrated into UniProtKB/TrEMBL:	October 19, 2011
Last sequence update:	October 19, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)