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Protein
Submitted name:

General secretion pathway protein D

Gene

BurJV3_2260

Organism
Stenotrophomonas maltophilia JV3
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciSMAL868597:GHCG-2314-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
General secretion pathway protein DImported
Gene namesi
ORF Names:BurJV3_2260Imported
OrganismiStenotrophomonas maltophilia JV3Imported
Taxonomic identifieri868597 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group
ProteomesiUP000000700 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2929 PotentialImportedAdd
BLAST
Chaini30 – 793764 PotentialImportedPRO_5000781268Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK02453.

Family and domain databases

InterProiIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR013356. T2SS_GspD.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 3 hits.
[Graphical view]
PRINTSiPR00811. BCTERIALGSPD.
TIGRFAMsiTIGR02517. type_II_gspD. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

G0K2F2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAMRSLACS TALALVVGMA HVPAPVAAQD ARDEPVQLNL VDTDIGGVLR
60 70 80 90 100
MAARFTGRQF LVDPRVTGKM TVVSDGPVSR TQAYQLLLGA LRMRGFAVVE
110 120 130 140 150
NGGVSRVVPQ ADAKLLGGRV GSGGAGGEIA TRTFALRYEN AAALVAVLRP
160 170 180 190 200
MISPDNPITA NPGNNTLVIT DYADNLERIA RVIASVDTPA GMDTDVVKLQ
210 220 230 240 250
QGIAVDVAAM VAPLLDAQGA EPSQRVVVMA DPRSNSVLLR SSSPGRTRLA
260 270 280 290 300
RQLVEKLDRA QDESGNLHVV YLRNAQANQL AGVLRGVVAG QSDAPAMGSN
310 320 330 340 350
EGITPLPGDA NRSTPAQPSQ PQQAKTGGNA LESQRLDPNR RDPIDAGSTG
360 370 380 390 400
FSQNGISVQA DVATNTLLIS APEPVYRNLR RVIDQLDQRR AQVLVESLIV
410 420 430 440 450
EVNQTDAAEL GVQWMLGNGR TFGGTHFGGT TGGSGLNTTA RTTLDVLPKD
460 470 480 490 500
GLKIGVIDGT INLPGVGQIL NMKALANALQ SKGGANILST PNLMTLDNEA
510 520 530 540 550
ASIMVGQTVP FVSGRYVTDG GGGSNNPFQT IVREDVGLKL RVRPQISEGG
560 570 580 590 600
TVKLDIYQEV SSIDAQGANS TAGIITNKRA LDTSVLLDDG QIMVLGGLLE
610 620 630 640 650
DSVSHGRDAV PGLGKLPVLG ALFRSDTRKR AKTNLMVFLR PHVVRDPAAG
660 670 680 690 700
QRLTRDRYDY MRNAQAGAQP VQSWALPALS APQLPPQDLS VLGQGNARDG
710 720 730 740 750
LGQPLQNTSL AALYPAGDGD AQLVQFAQGL DPARASQGVA QVRALGLQAY
760 770 780 790
AEATPGESGQ RLRVRLPRDP AKLDPALQQL RGLGYTPELV IGP
Length:793
Mass (Da):83,303
Last modified:October 19, 2011 - v1
Checksum:iC28657A33A984ED8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002986 Genomic DNA. Translation: AEM51582.1.
RefSeqiWP_014037412.1. NC_015947.1.
YP_004792808.1. NC_015947.1.

Genome annotation databases

EnsemblBacteriaiAEM51582; AEM51582; BurJV3_2260.
KEGGibuj:BurJV3_2260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002986 Genomic DNA. Translation: AEM51582.1.
RefSeqiWP_014037412.1. NC_015947.1.
YP_004792808.1. NC_015947.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEM51582; AEM51582; BurJV3_2260.
KEGGibuj:BurJV3_2260.

Phylogenomic databases

KOiK02453.

Enzyme and pathway databases

BioCyciSMAL868597:GHCG-2314-MONOMER.

Family and domain databases

InterProiIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR013356. T2SS_GspD.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 3 hits.
[Graphical view]
PRINTSiPR00811. BCTERIALGSPD.
TIGRFAMsiTIGR02517. type_II_gspD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: JV3Imported.

Entry informationi

Entry nameiG0K2F2_STEMA
AccessioniPrimary (citable) accession number: G0K2F2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 29, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.