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G0K266

- G0K266_STEMA

UniProt

G0K266 - G0K266_STEMA

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Protein
Submitted name: DNA ligase D
Gene
BurJV3_0025
Organism
Stenotrophomonas maltophilia JV3
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMAL868597:GHCG-25-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
ORF Names:BurJV3_0025Imported
OrganismiStenotrophomonas maltophilia JV3Imported
Taxonomic identifieri868597 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeStenotrophomonasStenotrophomonas maltophilia group
ProteomesiUP000000700: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0K266-1 [UniParc]FASTAAdd to Basket

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MSLHQYRRKR RLGGGAGQTP EPDETPARTD PKRRPIFVIQ LHHASSRHYD    50
FRLEMDGVLK SWAVPKGPSL RVGEKRLAVE VEDHPLSYAG FEGDIPEGHY 100
GAGHVDVFDH GTWACEGDPL QALAAGKIDF VLHGQRLAGG WKLVRTAMKG 150
RQVQWLLIKR SDEEARDAEA DDLLGAPAVM KRTAGKTGRA VPAARTSTRK 200
ADARWHARAL KLDGARDAPY PHGFKPQLTD HRDSAPDGAH WLHEIKWDGY 250
RLLADLHDGE VKLRSRNGLD WTDDFPEVVQ AVRALPVRDA RLDGELVVLD 300
PEGRSDFAAL QRVIDGSSKQ PLRYIVFDLP GVANADVSRA PLLERKALLK 350
DLIGPTPGIL AFSEHVIDHG PQVFDASGEA GFEGIVSKQV DAPYVNARAR 400
SWVKVKHEDT DEFVIVGYTA PRGSRVGFGS LLLATPDKEG LRYVGRVGTG 450
FDDENLRALF KALQPLAVKT PVLQLPAHVP FRAASVRWLK PVRVAEVAFR 500
GWGKEGLLRQ ASFKRLRSDK QKEDLGMSTA TADAEVGGEV QITHPERVVF 550
PRQRLSKGDV ADYYRRMARW ILPEIAGRPL SLLRCPDGVG KACFFQKHHG 600
PGLGDAVHAV PLQQKSGRED YVYIDDARGL LQLVQMNTLE LHPWGATVAD 650
PEHPDRLVFD LDPGDGVSWA QVKAGARDVR DRLQQVGLES FVRLSGGKGV 700
HVVVPLQPKA GWDEAKAFCE AFAQAMAQEQ PDRYVATMSK AKRRGVIFID 750
WLRNTRGATS VCSWSLRARD SAGVAVPLRW EELARVSAAD AFPMGKALAR 800
AKRLKGDPWQ GIARLKQTLP SLKQ 824
Length:824
Mass (Da):91,090
Last modified:October 19, 2011 - v1
Checksum:i3A108AC4632F8CD1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002986 Genomic DNA. Translation: AEM49361.1.
RefSeqiYP_004790587.1. NC_015947.1.

Genome annotation databases

EnsemblBacteriaiAEM49361; AEM49361; BurJV3_0025.
GeneIDi11044727.
KEGGibuj:BurJV3_0025.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002986 Genomic DNA. Translation: AEM49361.1 .
RefSeqi YP_004790587.1. NC_015947.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEM49361 ; AEM49361 ; BurJV3_0025 .
GeneIDi 11044727.
KEGGi buj:BurJV3_0025.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SMAL868597:GHCG-25-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: JV3Imported.

Entry informationi

Entry nameiG0K266_STEMA
AccessioniPrimary (citable) accession number: G0K266
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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