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G0JZ29 (G0JZ29_STEMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
G0JZ29 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 7068098ECE53B606

FASTA39643,003
        10         20         30         40         50         60 
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA ALTKIGAERF GGEFKDYSSI DAAPEEKARG 

        70         80         90        100        110        120 
ITISTAHVEY ESPIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLSRQVGVPY IVVFLNKADM VDDAELLELV EMEVRELLSK YEFPGDDTPI IAGSARLALE 

       190        200        210        220        230        240 
GDQSDIGVPA ILKLVDALDS WIPEPERAID KPFLMPVEDV FSISGRGTVV TGRIERGVIK 

       250        260        270        280        290        300 
VGDEIEIVGI RPVQKTTVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDDVE RGQVLAKPGT 

       310        320        330        340        350        360 
IKPHTKFEGE VYVLSKDEGG RHTPFFNGYR PQFYFRTTDI TGAAALPEGV EMVMPGDNVK 

       370        380        390 
MVVTLINPVA MDEGLRFAIR EGGRTVGAGV VSKIIE 

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References

[1]"Complete sequence of Stenotrophomonas maltophilia JV3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Medau R. expand/collapse author list , Furlan B., Mui Tsai S., Rodriques J., Tiedje J., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JV3 EMBL AEM50082.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002986 Genomic DNA. Translation: AEM50082.1.
CP002986 Genomic DNA. Translation: AEM50094.1.
RefSeqYP_004791308.1. NC_015947.1.
YP_004791320.1. NC_015947.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM50082; AEM50082; BurJV3_0748.
AEM50094; AEM50094; BurJV3_0760.
GeneID11045467.
11045480.
KEGGbuj:BurJV3_0748.
buj:BurJV3_0760.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycSMAL868597:GHCG-765-MONOMER.
SMAL868597:GHCG-778-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0JZ29_STEMA
AccessionPrimary (citable) accession number: G0JZ29
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)