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G0JR49 (G0JR49_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Acife_2615 EMBL AEM48695.1
OrganismAcidithiobacillus ferrivorans SS3 [Complete proteome] EMBL AEM48695.1
Taxonomic identifier743299 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G0JR49 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 20CC50680B798F11

FASTA45751,813
        10         20         30         40         50         60 
MVKRFTKDSD LTPAYGSRTM DHTISKYRLP DDEMPAQTAY QLIHDELMLD GNARLNLATF 

        70         80         90        100        110        120 
VTTWMEPEAE KLMAETFDKN MIDKDEYPQT AEIETRCVNM LARLFNAHPD EHPVGVSAIG 

       130        140        150        160        170        180 
SSEAVMLAGM ALKWNWRKRR EKAGASAATP NLVMGRSVQV VWEKFCRYWE VEPRYIPMHE 

       190        200        210        220        230        240 
DRYTLKSEEV LALVDENTIG VVTVLGTTFT GEFDPIAEIH DALVVHNQKT GLQVPIHVDA 

       250        260        270        280        290        300 
ASGGFVAPFL QPNLLWDFRL PNVVSINTSG HKYGLVYPGV GWALWRGEAH LPEELVFHVN 

       310        320        330        340        350        360 
YLGGDMPTFT LNFSRPGNQI IGQYYNLLRL GRAGYTRIMR NLRDTALWLS RSIARMGPFV 

       370        380        390        400        410        420 
LLSDGSSIPV FAMRLKDSSR FTVFDLSRQL RMRGWQVPAY TLPEDATELA VLRLVIREGF 

       430        440        450 
SRDMADLLLK DLKQAVTDLE QTPPAQKSQD DGHFHHN 

« Hide

References

[1]"Draft Genome of the Psychrotolerant Acidophile Acidithiobacillus ferrivorans SS3."
Liljeqvist M., Valdes J., Holmes D.S., Dopson M.
J. Bacteriol. 193:4304-4305(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SS3 EMBL AEM48695.1.
[2]US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Liljeqvist M. expand/collapse author list , Valdes J., Holmes D., Dopson M., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SS3 EMBL AEM48695.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002985 Genomic DNA. Translation: AEM48695.1.
RefSeqYP_004785021.1. NC_015942.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM48695; AEM48695; Acife_2615.
GeneID11043360.
KEGGafi:Acife_2615.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycAFER743299:GH39-2654-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG0JR49_9GAMM
AccessionPrimary (citable) accession number: G0JR49
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: January 22, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)