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G0JPS3 (G0JPS3_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Acife_1242 EMBL AEM47398.1
OrganismAcidithiobacillus ferrivorans SS3 [Complete proteome] EMBL AEM47398.1
Taxonomic identifier743299 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAcidithiobacillalesAcidithiobacillaceaeAcidithiobacillus

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G0JPS3 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 01DA54B22D6CD319

FASTA45950,246
        10         20         30         40         50         60 
MDQSNRYADL SLRENDLISN GKHILVAYKM KPKAGHGYLE AAAHFAAESS TGTNVEVSTT 

        70         80         90        100        110        120 
DDFTKGVDAL VYHIDEAADD MRIAYPLELF DRNVTDGRMM IVSFLTLVIG NNQGMGDIEH 

       130        140        150        160        170        180 
GQMIDFFMPP RAIQLFDGPA KDISDLWRIL GRPVQNGGYI AGTIIKPKLG LRPEPFAAAA 

       190        200        210        220        230        240 
YQFWLGGDFI KNDEPQGNQV FAPVKKTIPL VYDAMKRAMD ETGAAKLFSM NITADDHYEM 

       250        260        270        280        290        300 
CARADFALET FGPDADKLAF LVDGFVGGPG MITTARRQYP GQYLHYHRAG HGMITSPSAN 

       310        320        330        340        350        360 
RGYTAFVLAK MARLQGASGI HVGTMGYGKM EGGADDRNIA YMIERDSCDG PVYHQEWYGM 

       370        380        390        400        410        420 
KPTTPIISGG MNALRLPGFF ENLGHGNVIN TAGGGAYGHI DSPAAGAVSL RQAYECWKAG 

       430        440        450 
ADPIAYAREH QEFARAFESF PGDADKLYPG WREKLGVHK 

« Hide

References

[1]"Draft Genome of the Psychrotolerant Acidophile Acidithiobacillus ferrivorans SS3."
Liljeqvist M., Valdes J., Holmes D.S., Dopson M.
J. Bacteriol. 193:4304-4305(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SS3 EMBL AEM47398.1.
[2]US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Liljeqvist M. expand/collapse author list , Valdes J., Holmes D., Dopson M., Woyke T.
Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SS3 EMBL AEM47398.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002985 Genomic DNA. Translation: AEM47398.1.
RefSeqYP_004783724.1. NC_015942.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEM47398; AEM47398; Acife_1242.
GeneID11044196.
KEGGafi:Acife_1242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Enzyme and pathway databases

BioCycAFER743299:GH39-1254-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0JPS3_9GAMM
AccessionPrimary (citable) accession number: G0JPS3
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: February 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)