Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G0J796 (G0J796_CYCMS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length538 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G0J796 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 0E93994AD57FD27E

FASTA53862,435
        10         20         30         40         50         60 
MKDFVRLFIQ LDQTTKTLKK VAALVEYFDN AEESDKLWTI AILSHKRPKR TVRTSLLRSW 

        70         80         90        100        110        120 
AASAANVPLW LFEESYHIVG DLAETMALMH PNLISKHNKS LSEWISFIIN LKNLEDDHTI 

       130        140        150        160        170        180 
ESANLETKRQ KVLWAWDQLD ETERFVFNKL MTGSWRVGVS QKLMTRALAQ HSGINENTLS 

       190        200        210        220        230        240 
HRLMGNWSAE TSSYHQLIIE TDPADKISQP YPFYLAYGLE NEIHELGKPK DWLAERKWDG 

       250        260        270        280        290        300 
IRGQLIIREN QLFLWSRGEE LITDKFPEFE ILIEKLPNGT VIDGEIIAYQ LDQPLGFNVL 

       310        320        330        340        350        360 
QSRIGRKNVS KNILDKAPVV MIAYDLLELN GKDIRESPLH YRRQELEKLV KQGASEKLLI 

       370        380        390        400        410        420 
SEVVQFNEWE DLIKERADSR IYHAEGLMLK SKFGTYKVGR KKGDWWKWKI DPLTIDAVLL 

       430        440        450        460        470        480 
YAMRGHGRRA NLYTDYTFAV WKGNELVPFA KAYSGLTDKE INEVDAFVKR NTIERFGPVR 

       490        500        510        520        530 
SVKPALVFEI AFEGIARSSR HKSGVALRFP RMHRWRKDKP VHEANTLEDL ELLLNLYG 

« Hide

References

[1]"The complete genome of Cyclobacterium marinum DSM 745."
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Chertkov O., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. expand/collapse author list , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Schuetze A., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25205 / DSM 745.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002955 Genomic DNA. Translation: AEL27729.1.
RefSeqYP_004775960.1. NC_015914.1.

3D structure databases

ProteinModelPortalG0J796.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEL27729; AEL27729; Cycma_4021.
GeneID11036071.
KEGGcmr:Cycma_4021.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAGEFYPFQ.

Enzyme and pathway databases

BioCycCMAR880070:GHDK-4066-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0J796_CYCMS
AccessionPrimary (citable) accession number: G0J796
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)