SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

G0J796

- G0J796_CYCMS

UniProt

G0J796 - G0J796_CYCMS

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP dependent DNA ligase

Gene
Cycma_4021
Organism
Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCMAR880070:GHDK-4066-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cycma_4021Imported
OrganismiCyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)Imported
Taxonomic identifieri880070 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeCyclobacterium
ProteomesiUP000001635: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0J796.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiGEFYPFQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0J796-1 [UniParc]FASTAAdd to Basket

« Hide

MKDFVRLFIQ LDQTTKTLKK VAALVEYFDN AEESDKLWTI AILSHKRPKR    50
TVRTSLLRSW AASAANVPLW LFEESYHIVG DLAETMALMH PNLISKHNKS 100
LSEWISFIIN LKNLEDDHTI ESANLETKRQ KVLWAWDQLD ETERFVFNKL 150
MTGSWRVGVS QKLMTRALAQ HSGINENTLS HRLMGNWSAE TSSYHQLIIE 200
TDPADKISQP YPFYLAYGLE NEIHELGKPK DWLAERKWDG IRGQLIIREN 250
QLFLWSRGEE LITDKFPEFE ILIEKLPNGT VIDGEIIAYQ LDQPLGFNVL 300
QSRIGRKNVS KNILDKAPVV MIAYDLLELN GKDIRESPLH YRRQELEKLV 350
KQGASEKLLI SEVVQFNEWE DLIKERADSR IYHAEGLMLK SKFGTYKVGR 400
KKGDWWKWKI DPLTIDAVLL YAMRGHGRRA NLYTDYTFAV WKGNELVPFA 450
KAYSGLTDKE INEVDAFVKR NTIERFGPVR SVKPALVFEI AFEGIARSSR 500
HKSGVALRFP RMHRWRKDKP VHEANTLEDL ELLLNLYG 538
Length:538
Mass (Da):62,435
Last modified:October 19, 2011 - v1
Checksum:i0E93994AD57FD27E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002955 Genomic DNA. Translation: AEL27729.1.
RefSeqiWP_014022014.1. NC_015914.1.
YP_004775960.1. NC_015914.1.

Genome annotation databases

EnsemblBacteriaiAEL27729; AEL27729; Cycma_4021.
GeneIDi11036071.
KEGGicmr:Cycma_4021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002955 Genomic DNA. Translation: AEL27729.1 .
RefSeqi WP_014022014.1. NC_015914.1.
YP_004775960.1. NC_015914.1.

3D structure databases

ProteinModelPortali G0J796.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEL27729 ; AEL27729 ; Cycma_4021 .
GeneIDi 11036071.
KEGGi cmr:Cycma_4021.

Phylogenomic databases

KOi K01971.
OMAi GEFYPFQ.

Enzyme and pathway databases

BioCyci CMAR880070:GHDK-4066-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25205 / DSM 745.

Entry informationi

Entry nameiG0J796_CYCMS
AccessioniPrimary (citable) accession number: G0J796
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi