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G0J796

- G0J796_CYCMS

UniProt

G0J796 - G0J796_CYCMS

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cycma_4021

Organism
Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCMAR880070:GHDK-4066-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Cycma_4021Imported
    OrganismiCyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)Imported
    Taxonomic identifieri880070 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeCyclobacterium
    ProteomesiUP000001635: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG0J796.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGEFYPFQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0J796-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKDFVRLFIQ LDQTTKTLKK VAALVEYFDN AEESDKLWTI AILSHKRPKR    50
    TVRTSLLRSW AASAANVPLW LFEESYHIVG DLAETMALMH PNLISKHNKS 100
    LSEWISFIIN LKNLEDDHTI ESANLETKRQ KVLWAWDQLD ETERFVFNKL 150
    MTGSWRVGVS QKLMTRALAQ HSGINENTLS HRLMGNWSAE TSSYHQLIIE 200
    TDPADKISQP YPFYLAYGLE NEIHELGKPK DWLAERKWDG IRGQLIIREN 250
    QLFLWSRGEE LITDKFPEFE ILIEKLPNGT VIDGEIIAYQ LDQPLGFNVL 300
    QSRIGRKNVS KNILDKAPVV MIAYDLLELN GKDIRESPLH YRRQELEKLV 350
    KQGASEKLLI SEVVQFNEWE DLIKERADSR IYHAEGLMLK SKFGTYKVGR 400
    KKGDWWKWKI DPLTIDAVLL YAMRGHGRRA NLYTDYTFAV WKGNELVPFA 450
    KAYSGLTDKE INEVDAFVKR NTIERFGPVR SVKPALVFEI AFEGIARSSR 500
    HKSGVALRFP RMHRWRKDKP VHEANTLEDL ELLLNLYG 538
    Length:538
    Mass (Da):62,435
    Last modified:October 19, 2011 - v1
    Checksum:i0E93994AD57FD27E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002955 Genomic DNA. Translation: AEL27729.1.
    RefSeqiWP_014022014.1. NC_015914.1.
    YP_004775960.1. NC_015914.1.

    Genome annotation databases

    EnsemblBacteriaiAEL27729; AEL27729; Cycma_4021.
    GeneIDi11036071.
    KEGGicmr:Cycma_4021.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002955 Genomic DNA. Translation: AEL27729.1 .
    RefSeqi WP_014022014.1. NC_015914.1.
    YP_004775960.1. NC_015914.1.

    3D structure databases

    ProteinModelPortali G0J796.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEL27729 ; AEL27729 ; Cycma_4021 .
    GeneIDi 11036071.
    KEGGi cmr:Cycma_4021.

    Phylogenomic databases

    KOi K01971.
    OMAi GEFYPFQ.

    Enzyme and pathway databases

    BioCyci CMAR880070:GHDK-4066-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25205 / DSM 745Imported.

    Entry informationi

    Entry nameiG0J796_CYCMS
    AccessioniPrimary (citable) accession number: G0J796
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3