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G0IY51

- G0IY51_CYCMS

UniProt

G0IY51 - G0IY51_CYCMS

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Protein
Submitted name:

DNA ligase D

Gene

Cycma_1183

Organism
Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCMAR880070:GHDK-1191-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:Cycma_1183Imported
OrganismiCyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)Imported
Taxonomic identifieri880070 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeCyclobacterium
ProteomesiUP000001635: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0IY51.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiDWTIRSI.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0IY51-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MGLKAYREKR SFNDTSEPKG VVENTHQFRF VVQRHRARKL HYDLRLEIDG
60 70 80 90 100
VLKSWAVPKG PSMNPRDKRL AVQTEDHPVA YLSFEGLIPK GNYGAGKMTI
110 120 130 140 150
WDEGNFQSLQ QPNDLCKDHK KGKLKIIFHG SKLKGIFTLV RSSSMNKKDQ
160 170 180 190 200
WLLIKHDDAF ATDLDYDAED FNEEAFSSGP GENSKKLDLK SLIKPMLASP
210 220 230 240 250
GTKIFNDKDW IYELKYDGYR AIANIRNDKV ELYSRNGISL NEKFQPIYKE
260 270 280 290 300
LKKIEHTAIL DGEIVVLDKN GLPQFNSLQN YDKQSTKGRL VYYVFDLLHL
310 320 330 340 350
NDHDTLGLPL IDRKQLLKDL IPENTHIRYC DHVETMGITV YDRAIDMGME
360 370 380 390 400
GVIAKKANST YDLNSRSANW LKFKKIENTE TIICGYTLSN KKSRKFGSLI
410 420 430 440 450
LGMVEEGQLT YVGTCGTGFS EEQLTEMYFK FEVLKTKNPV FNIRKHLKGR
460 470 480 490 500
EAVWLIPKLI CEVKFSEWTS SKVMRHPVFL RLREDKNLNF EPNQIPLKKT
510 520 530 540 550
ASKKTGEDAF SLKVDDIMVS ITHPEKSYWP ESGYTKYDLL DYYIQMSDLI
560 570 580 590 600
LPYLKDRPES LHRHPSGIHG ESFYQKDHEH LPEWIDTHGI HSSSSDKEIN
610 620 630 640 650
YLLCQQKATL LYLNNLGCIE LHPWHSTIYQ LDYPDYAILD LDPSEENTFE
660 670 680 690 700
EVMETALATK EILKQANIKG YCKTSGSSGL HIYLPMGGKY TYEEARNFTK
710 720 730 740 750
LLCYFIQEKL PKLTTLERSL KKRGPKIYLD YLQNRKGQTI VAPYSLRPRL
760 770 780 790 800
HAPVSMPLLW SELKPGLKIT DFTIKTVPKL MEDRKDSFKP VLGKAIDMSS

AIAHLNNL
Length:808
Mass (Da):93,174
Last modified:October 19, 2011 - v1
Checksum:iCA01958AEA058DC1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002955 Genomic DNA. Translation: AEL24955.1.
RefSeqiYP_004773186.1. NC_015914.1.

Genome annotation databases

EnsemblBacteriaiAEL24955; AEL24955; Cycma_1183.
GeneIDi11037490.
KEGGicmr:Cycma_1183.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002955 Genomic DNA. Translation: AEL24955.1 .
RefSeqi YP_004773186.1. NC_015914.1.

3D structure databases

ProteinModelPortali G0IY51.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEL24955 ; AEL24955 ; Cycma_1183 .
GeneIDi 11037490.
KEGGi cmr:Cycma_1183.

Phylogenomic databases

KOi K01971.
OMAi DWTIRSI.

Enzyme and pathway databases

BioCyci CMAR880070:GHDK-1191-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25205 / DSM 745Imported.

Entry informationi

Entry nameiG0IY51_CYCMS
AccessioniPrimary (citable) accession number: G0IY51
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: October 1, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3