SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

G0IY51

- G0IY51_CYCMS

UniProt

G0IY51 - G0IY51_CYCMS

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA ligase D

Gene
Cycma_1183
Organism
Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCMAR880070:GHDK-1191-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:Cycma_1183Imported
OrganismiCyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)Imported
Taxonomic identifieri880070 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeCyclobacterium
ProteomesiUP000001635: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG0IY51.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiDWTIRSI.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0IY51-1 [UniParc]FASTAAdd to Basket

« Hide

MGLKAYREKR SFNDTSEPKG VVENTHQFRF VVQRHRARKL HYDLRLEIDG    50
VLKSWAVPKG PSMNPRDKRL AVQTEDHPVA YLSFEGLIPK GNYGAGKMTI 100
WDEGNFQSLQ QPNDLCKDHK KGKLKIIFHG SKLKGIFTLV RSSSMNKKDQ 150
WLLIKHDDAF ATDLDYDAED FNEEAFSSGP GENSKKLDLK SLIKPMLASP 200
GTKIFNDKDW IYELKYDGYR AIANIRNDKV ELYSRNGISL NEKFQPIYKE 250
LKKIEHTAIL DGEIVVLDKN GLPQFNSLQN YDKQSTKGRL VYYVFDLLHL 300
NDHDTLGLPL IDRKQLLKDL IPENTHIRYC DHVETMGITV YDRAIDMGME 350
GVIAKKANST YDLNSRSANW LKFKKIENTE TIICGYTLSN KKSRKFGSLI 400
LGMVEEGQLT YVGTCGTGFS EEQLTEMYFK FEVLKTKNPV FNIRKHLKGR 450
EAVWLIPKLI CEVKFSEWTS SKVMRHPVFL RLREDKNLNF EPNQIPLKKT 500
ASKKTGEDAF SLKVDDIMVS ITHPEKSYWP ESGYTKYDLL DYYIQMSDLI 550
LPYLKDRPES LHRHPSGIHG ESFYQKDHEH LPEWIDTHGI HSSSSDKEIN 600
YLLCQQKATL LYLNNLGCIE LHPWHSTIYQ LDYPDYAILD LDPSEENTFE 650
EVMETALATK EILKQANIKG YCKTSGSSGL HIYLPMGGKY TYEEARNFTK 700
LLCYFIQEKL PKLTTLERSL KKRGPKIYLD YLQNRKGQTI VAPYSLRPRL 750
HAPVSMPLLW SELKPGLKIT DFTIKTVPKL MEDRKDSFKP VLGKAIDMSS 800
AIAHLNNL 808
Length:808
Mass (Da):93,174
Last modified:October 19, 2011 - v1
Checksum:iCA01958AEA058DC1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002955 Genomic DNA. Translation: AEL24955.1.
RefSeqiYP_004773186.1. NC_015914.1.

Genome annotation databases

EnsemblBacteriaiAEL24955; AEL24955; Cycma_1183.
GeneIDi11037490.
KEGGicmr:Cycma_1183.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002955 Genomic DNA. Translation: AEL24955.1 .
RefSeqi YP_004773186.1. NC_015914.1.

3D structure databases

ProteinModelPortali G0IY51.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEL24955 ; AEL24955 ; Cycma_1183 .
GeneIDi 11037490.
KEGGi cmr:Cycma_1183.

Phylogenomic databases

KOi K01971.
OMAi DWTIRSI.

Enzyme and pathway databases

BioCyci CMAR880070:GHDK-1191-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25205 / DSM 745.

Entry informationi

Entry nameiG0IY51_CYCMS
AccessioniPrimary (citable) accession number: G0IY51
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi