Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Isocitrate dehydrogenase

Gene

Cycma_0445

Organism
Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciCMAR880070:GHDK-451-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenaseImported
Gene namesi
Ordered Locus Names:Cycma_0445Imported
OrganismiCyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus)Imported
Taxonomic identifieri880070 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeCyclobacterium
ProteomesiUP000001635 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi880070.Cycma_0445.

Structurei

3D structure databases

ProteinModelPortaliG0IWN1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

KOiK00031.
OMAiHRQTDEV.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G0IWN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEKRKITVA YGDGIGPEIM NATLSILEAA GAAIEPDVIE IGEQVYLKGI
60 70 80 90 100
SSGIASSAWD SLRETKVFLK SPITTPQGGG FKSLNVTTRK TLGLYANVRP
110 120 130 140 150
CKAYSPFIHT HFPKTDLVII RENEEDLYAG IEHRQTDEVY QCLKLISRPG
160 170 180 190 200
SEKIIRYAFE YARMNKRKKV TCMTKDNIMK MTDGVFHEVF NEVAKEYPDI
210 220 230 240 250
ETDHKIIDIA TALIADSPEI FDVIVTLNLY GDIISDVAAQ VTGSVGLGGS
260 270 280 290 300
ANVGEDVAMF EAIHGSAPDI AGMDIANPSG LLNGAIMMLV HIGQPEVAQK
310 320 330 340 350
ISNAWMATLE DGIHTGDIYQ EDISTKRVGT KEFAEAVIAR LGKEPQRMKK
360 370 380 390 400
AVFAKAERSQ AEIKQALAIK PRTPAVKELI GLDVFIDWKE GSRDPNVMGD
410 420 430 440 450
KLRSVNADGL KMQLVTNRGV RVYPDGMEET FCSDHWRVRF FDADDQAISH
460 470 480
DQIIEVLKQI GDLGFDFVKI ENLYTFNGER GFSLAQGE
Length:488
Mass (Da):53,856
Last modified:October 19, 2011 - v1
Checksum:iEF67EC7227AB82B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002955 Genomic DNA. Translation: AEL24223.1.
RefSeqiWP_014018522.1. NC_015914.1.

Genome annotation databases

EnsemblBacteriaiAEL24223; AEL24223; Cycma_0445.
KEGGicmr:Cycma_0445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002955 Genomic DNA. Translation: AEL24223.1.
RefSeqiWP_014018522.1. NC_015914.1.

3D structure databases

ProteinModelPortaliG0IWN1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi880070.Cycma_0445.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEL24223; AEL24223; Cycma_0445.
KEGGicmr:Cycma_0445.

Phylogenomic databases

KOiK00031.
OMAiHRQTDEV.

Enzyme and pathway databases

BioCyciCMAR880070:GHDK-451-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR014273. Isocitrate_DH_aproteobac-typ.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11835. PTHR11835. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
PROSITEiPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25205 / DSM 745Imported.

Entry informationi

Entry nameiG0IWN1_CYCMS
AccessioniPrimary (citable) accession number: G0IWN1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: July 22, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.