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G0ING5

- G0ING5_BACAM

UniProt

G0ING5 - G0ING5_BACAM

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligD

Organism
Bacillus amyloliquefaciens XH7
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (19 Oct 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBAMY1034836:GL8J-2175-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Name:ligDImported
    ORF Names:BAXH7_02135Imported
    OrganismiBacillus amyloliquefaciens XH7Imported
    Taxonomic identifieri1034836 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000001437: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG0ING5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G0ING5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVLTMQPILT SAPPTGSEWR YEVKYDGFRC LLRIDESGVT LTSRNGQTLT    50
    NQFPEITAFA VLCFQHMKDR FPITLDGELV YLVNPYRADF EHIQIRGRLK 100
    RAEAIENIAN KRPCRFLAFD LLVLKGAATV SLPYVKRKHA LFKLFEEANL 150
    PLSPRHLAEE AIQYIPEHTD FEALWDKVVR YDGEGIVAKR VSSGWAENKR 200
    SPDWQKYKHM KTAHVLLTGF NPKNGYVTAS VLKDGTAVPV ASVSHGMQAE 250
    EKNAVRTIME THGKKLKNGE YSLEPSICMT VQYLTILQDT LREVSFVSFQ 300
    FGMDWTECTY QQLILRSKTL PPELQFTSLD KVVFKKREKT KEDFLCYMVK 350
    MSDVLLPFLK DRAVTVIRYP HGAPGESFFQ KNKPDYTPDF VSSVFDGSHE 400
    HIVCNSIPSL LWLANQLALE FHVPFQTVHS KRPAEIVIDL DPPSRNDFPM 450
    AVEAAHVLKE LFDSFSITSF PKLSGNKGIQ LYIPLSPEAF TYEETRAFTM 500
    LIADYCVRTR PDLFTTERFI KNRNGRLYLD YLQHAEGKTI IAPYSTRGNE 550
    LGTVAAPLYW NEVNSSLTPD DYTIDTVVNR VRTEGDPFYE FYRNPQDGPL 600
    SIVLEQIKRK S 611
    Length:611
    Mass (Da):69,907
    Last modified:October 19, 2011 - v1
    Checksum:i66CA9807276541E3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002927 Genomic DNA. Translation: AEK89267.1.
    RefSeqiWP_013352013.1. NC_017191.1.
    YP_005550115.1. NC_017191.1.

    Genome annotation databases

    EnsemblBacteriaiAEK89267; AEK89267; BAXH7_02135.
    GeneIDi12197086.
    KEGGibxh:BAXH7_02135.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002927 Genomic DNA. Translation: AEK89267.1 .
    RefSeqi WP_013352013.1. NC_017191.1.
    YP_005550115.1. NC_017191.1.

    3D structure databases

    ProteinModelPortali G0ING5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEK89267 ; AEK89267 ; BAXH7_02135 .
    GeneIDi 12197086.
    KEGGi bxh:BAXH7_02135.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BAMY1034836:GL8J-2175-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Bacillus amyloliquefaciens XH7, Which Exhibits Production of Purine Nucleosides."
      Yang H., Liao Y., Wang B., Lin Y., Pan L.
      J. Bacteriol. 193:5593-5594(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: XH7Imported.

    Entry informationi

    Entry nameiG0ING5_BACAM
    AccessioniPrimary (citable) accession number: G0ING5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 19, 2011
    Last sequence update: October 19, 2011
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3