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G0HMP8 (G0HMP8_THES4) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable brix domain-containing ribosomal biogenesis protein HAMAP-Rule MF_00699
Gene names
Ordered Locus Names:GQS_02920
OrganismThermococcus sp. (strain CGMCC 1.5172 / 4557) [Complete proteome] [HAMAP] EMBL AEK72485.1
Taxonomic identifier1042877 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Thermococcus

Protein attributes

Sequence length210 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Probably involved in the biogenesis of the ribosome By similarity. HAMAP-Rule MF_00699

Sequence similarities

Contains 1 Brix domain. HAMAP-Rule MF_00699

Ontologies

Keywords
   Biological processRibosome biogenesis HAMAP-Rule MF_00699
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processribosome biogenesis

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain1 – 196196Brix By similarity HAMAP-Rule MF_00699

Sequences

Sequence LengthMass (Da)Tools
G0HMP8 [UniParc].

Last modified October 19, 2011. Version 1.
Checksum: 1431090A761DD737

FASTA21024,568
        10         20         30         40         50         60 
MMLITTSHRP TRRTRSFGHD LEKVFPNSLY LTRGKKTVQD LLMEAYDRNY ERLLIVNVWK 

        70         80         90        100        110        120 
GNPLKMTFIK VDPEDWGYLG YMYLHGIKLQ REIGFRDIRP IREEMPLVVT TAKRVGLDHV 

       130        140        150        160        170        180 
AFAQVFAELT GGKFVPRKER SLLGIADRYN TDVLSVIERH PRGMAVNFYR LDVNKEKAVG 

       190        200        210 
PLISVKIWIM EDGRRWDYKE AILKRGPSKE

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References

[1]"Complete genome sequence of Thermococcus sp. strain 4557, a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area."
Wang X., Gao Z., Xu X., Ruan L.
J. Bacteriol. 193:5544-5545(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CGMCC 1.5172 / 4557.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002920 Genomic DNA. Translation: AEK72485.1.
RefSeqYP_004762162.1. NC_015865.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEK72485; AEK72485; GQS_02920.
GeneID11015235.
KEGGthe:GQS_02920.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK14561.
OMAMLITTSH.

Family and domain databases

HAMAPMF_00699. BriX.
InterProIPR004154. Anticodon-bd.
IPR007109. Brix.
IPR023548. Brix_archaea.
[Graphical view]
PfamPF04427. Brix. 1 hit.
[Graphical view]
SMARTSM00879. Brix. 1 hit.
[Graphical view]
SUPFAMSSF52954. Anticodon_bd. 1 hit.
PROSITEPS50833. BRIX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG0HMP8_THES4
AccessionPrimary (citable) accession number: G0HMP8
Entry history
Integrated into UniProtKB/TrEMBL: October 19, 2011
Last sequence update: October 19, 2011
Last modified: April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info